Re: [galaxy-user] Multiple sample runs using workflow

2012-04-04 Thread Jennifer Jackson
Hi Raj, To run the workflow on multiple samples, start it up on each paired set individually. These can be initiated to run in parallel. A 'master workflow' controller that would manage workflows as modules in a larger pipeline (or something similar) has been discussed, but any development i

[galaxy-user] Multiple sample runs using workflow

2012-04-04 Thread Praveen Raj Somarajan
Hello All, I'm seeking help on how do we run a workflow (say bwa mapping on PE data) on multiple samples (eg: 10 samples, PE data) together. I assume "multiple input files selection" option does not work here as the workflow accepts two fastq input files (PE data). Do you have any experience o