e expression, and then compare between
conditions.
Thanks in advance,
Jianguang
From: Jennifer Jackson [j...@bx.psu.edu]
Sent: Thursday, September 06, 2012 12:38 PM
To: Du, Jianguang
Cc: galaxy-user@lists.bx.psu.edu; closetic...@galaxyproject.org
Subject
ianguang
Cc: galaxy-user@lists.bx.psu.edu; closetic...@galaxyproject.org
Subject: Re: [galaxy-user] Please help to understand the square root of
Jensen-Shannon divergence
Hello Jianguang,
Fold is included in the Cuffdiff output. Section "Differential
expression tests", first file, co
Hello Jianguang,
Fold is included in the Cuffdiff output. Section "Differential
expression tests", first file, column #9.
http://cufflinks.cbcb.umd.edu/manual.html
Hopefully this helps,
Jen
Galaxy team
On 9/4/12 1:16 PM, Du, Jianguang wrote:
Dear All,
I am looking for the differential spli
Dear All,
I am looking for the differential splicing events between cell types. However
the Cuffdiff gives output using "the square root of Jensen-shannon divergence"
to measure the difference.
Although I tried my best to understand "the definition of the square root of
Jensen-shannon divergen
4 matches
Mail list logo
