Dear All, I am looking for the differential splicing events between cell types. However the Cuffdiff gives output using "the square root of Jensen-shannon divergence" to measure the difference.
Although I tried my best to understand "the definition of the square root of Jensen-shannon divergence", I still could not understand the meaning of a specific value of "the square root of Jensen-shannon divergence". I would appreciate it very much if anyone let me know how to covert "the square root of Jensen-shannon divergence" into "fold". For example, how much "the square root of Jensen-shannon divergence" is "2 fold difference" equal to. Thanks in advance. Jianguang
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