Re: [galaxy-user] RE : % On-Off target

2011-12-20 Thread Ross
Hi Antoine. Thanks - sorry, I haven't analysed that particular platform - anyone? http://picard.sourceforge.net/picard-metric-definitions.shtml#HsMetrics seems comprehensive... Why not try the Galaxy picard Hybrid Selection metrics tool on your data? On Wed, Dec 21, 2011 at 6:25 PM, Antoine ROUSS

[galaxy-user] RE : % On-Off target

2011-12-20 Thread Antoine ROUSSELIN
Hello, My English is very bad, it's a shame! My I have a file for my baits (create a bed file of your Agilent SureSelect targets with exons and introns captured). Sequencing output, I get the files. Bam, my result sets of alignments on the human genome complete (with CASAVA). I try to get the