Re: [galaxy-user] barcode splitter and clustering analyses?

2011-11-28 Thread Jennifer Jackson
Hello Simon, You are correct, Galaxy does not have a tool to do this exact operation in one step, but the "Join, Subtract and Group -> Group" tool may be able to generate the statistics you want from a tabular file containing the linked data. Such as: clusterID -> sequenceID -> barcodeID. Crea

[galaxy-user] barcode splitter and clustering analyses?

2011-11-23 Thread Simon Bulman
Dear Galaxy we have a 454 metagenomic dataset. We have used barcode splitter to divide the dataset into it's constituent amplicons. We have also been using a clustering application (dnaclust) in Galaxy to subdivide the dataset by similarity. My question is; are there Galaxy tools to allow the