Re: [galaxy-user] cloud instance of galaxy

2012-05-24 Thread Dave Clements
Hi Tom, An update from the CloudMan developers: This will be fixed in the next release, which is imminent. Thanks, Dave C. On Thu, May 24, 2012 at 11:04 AM, Dave Clements wrote: > Hi Tom, > > The cloud image has the reference data for hg19 and mm9. However, it does > not come with fully conf

Re: [galaxy-user] cloud instance of galaxy

2012-05-24 Thread Dave Clements
Hi Tom, The cloud image has the reference data for hg19 and mm9. However, it does not come with fully configured loc files for every tool that takes advantage of all that preloaded data. Try updating the loc file for the Extract Genomic DNA tool. Dave C. On Wed, May 23, 2012 at 11:07 AM, Randa

[galaxy-user] cloud instance of galaxy

2012-05-23 Thread Randall, Thomas (NIH/NIEHS) [C]
I have put up an instance of galaxy on the cloud and as a simple test am trying to retrieve hg19 sequences corresponding to a bed file using the Extract Genomic DNA tool. hg19 is supposed to be a "loaded, system installed build" yet I get an error message stating that "No sequences are available