Amit,
Extract Genomic DNA seq option in Galaxy will be useful.
Vasu
--- On Thu, 4/14/11, pande wrote:
From: pande
Subject: [galaxy-user] extraction of intervals
To: galaxy-user@lists.bx.psu.edu
Date: Thursday, April 14, 2011, 8:14 AM
Dear Galaxy,
I have two ChIP reads and want to extract the regions in
between them . For example chr1:66585377-66585400 and chr1:66585616-66585639
and now I would like to extract the region beginning from 665855401 up to
66585615.
Can I get help from Galaxy tools.
regards,
Amit
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
