Re: [galaxy-user] fastqc and blast? trinity?

2013-12-16 Thread Jennifer Jackson
Hi Jorge, I see that Peter helped with the Blast question (thanks Peter!), but you are having trouble with Trinity, too. Trinity should work without any issues to my knowledge. Make sure that you are running the latest distribution (or cloudman) and have all

Re: [galaxy-user] fastqc and blast? trinity?

2013-12-14 Thread Peter Cock
On Sat, Dec 14, 2013 at 8:52 AM, Jorge Braun wrote: > > Hello, of course, Jennifer is right for the first question . For > the second question about blast ... I wonder if running after > blast in galaxy I can remove sequences that can contaminate > the data. It's possible? > The BLAST suite is n

[galaxy-user] fastqc and blast? trinity?

2013-12-14 Thread Jorge Braun
Hello, of course, Jennifer is right for the first question 😊 . For the second question about blast ... I wonder if running after blast in galaxy I can remove sequences that can contaminate the data. It's possible? Last question, trinity is 100% operational in galaxy? Because trinity ran but th