I have to say that's a very nice visualization. Well done.
Jim
On Apr 20, 2011, at 9:28 PM, Jeremy Goecks wrote:
Vasu,
Here are the steps to create this visualization; this is relatively
new functionality, and you'll want to use our test server ( http://test.g2.bx.psu.edu/
) for now.
Vasu,
Here are the steps to create this visualization; this is relatively new
functionality, and you'll want to use our test server (
http://test.g2.bx.psu.edu/ ) for now.
(1) Create a new visualization from the main menu: Visualization --> New Track
Browser and choose your genome build.
(2) A
Thanks Jeremy,
This appear to be a useful function. Could you please enlist the steps in
workflow to achieve the above visualization or alternatively point me to the
URL where it is summarized please. I believe it will take Tophat out put Bam
file and fpkm tracking file. I tri
Jim,
Thanks. My idea is to explore any option for visualizing RPKM in IGV or Galaxy
or any other common tool. Since Galaxy has created some additional
visualization track with Genome browser so I want to have feedback from other
users.
Thanks
--- On Thu, 4/14/11, Daniel Blankenberg
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