[gmx-users] reg g_morph

Dear justin,    Thank you for your previous patient reply When i use  trjconv tool using -b -e option i have got the number of intermediate structures. for the selected time interval  i have used the  pdb of first and last (obtained throug trjconv)  in g_morph tools to get

Re: [gmx-users] reg g_morph

vidhya sankar wrote: Dear justin, Thank you for your previous patient reply When i use trjconv tool using -b -e option i have got the number of intermediate structures. for the selected time interval i have used the pdb of first and last (obtained throug trjconv) in

[gmx-users] reg g_morph

dear justin,   Thank u for your atonce reply. I know that there is no relation between structure obtained by trjconv and g_morph. But the time factor for each pdb as TITLE frame t= 0.091 . on which basis  this time factor present in interm.pdb files because g_morph tool does

Re: [gmx-users] reg g_morph

vidhya sankar wrote: dear justin, Thank u for your atonce reply. I know that there is no relation between structure obtained by trjconv and g_morph. But the time factor for each pdb as TITLE frame t= 0.091 . on which basis this time factor present in interm.pdb files

Re: [gmx-users] help on mdrun

I am not sure I can give an affirmative working answer, but you may check ssh to each node, use top to see whether it's really run or just occupy the node but not use. On Sat, Jul 9, 2011 at 8:56 AM, Mark Abraham mark.abra...@anu.edu.au wrote: On 9/07/2011 3:37 AM, raghu...@bcpindia.org