Re: [graph-tool] Correlation Histogram

2017-02-12 Thread Tiago de Paula Peixoto
On 12.02.2017 12:53, P-M wrote: > Yup, that would explain it. D is in the order of 10^5 in this case. Would I > be able to write a more memory-efficient script manually with sparse > matrices or is the underlying code already fairly optimised in this regard? Of course, you could do a lot better

Re: [graph-tool] Correlation Histogram

2017-02-12 Thread P-M
Yup, that would explain it. D is in the order of 10^5 in this case. Would I be able to write a more memory-efficient script manually with sparse matrices or is the underlying code already fairly optimised in this regard? Best, Philipp -- View this message in context:

Re: [graph-tool] Correlation Histogram

2017-02-11 Thread Tiago de Paula Peixoto
On 10.02.2017 15:14, P-M wrote: > Those functions were very useful (as was the tip about the environment > variable). I couldn't find them anywhere in the documentation though. Would > it be possible to add them? It's now in git. > Thank you for the help, alas, in this case even limiting the

Re: [graph-tool] Correlation Histogram

2017-02-09 Thread Alexandre Hannud Abdo
Well, yes. Though you can configure your shell and make it permanent. Software Carpentry has some good tutorials on using the shell, for example: http://swcarpentry.github.io/shell-extras/08-environment-variables.html You can also modify the environment from within Python, using the "os.environ"

Re: [graph-tool] Correlation Histogram

2017-02-09 Thread P-M
Thanks! I presume this won't impact already running processes and is only valid for as long as my instance of PuTTY is running and after that revert to normal? -- View this message in context:

[graph-tool] Correlation Histogram

2017-02-08 Thread P-M
I am trying to obtain the correlation histogram for a graph of mine following the example given in the manual. I run: g = gt.load_graph('graph.gt') gt.remove_parallel_edges(g) h=gt.corr_hist(g,'out','out') My graph is relatively large at 12,238,931 vertices and 24,884,365 edges. My problem is