Re: [graph-tool] Analysing and visualising

2020-04-23 Thread James Ruffle
Hi Peter. Just as Stuart also said - brew was how I got it working on Mac OS successfully. BW James > On 24 Apr 2020, at 06:00, Berg, Stuart wrote: > > Hi Peter, > > I don't know the answer to your question about Docker and X11. But just in > case it's useful, I'll point out that the ea

Re: [graph-tool] Analysing and visualising

2020-04-23 Thread Berg, Stuart
Hi Peter, I don't know the answer to your question about Docker and X11. But just in case it's useful, I'll point out that the easiest way to run graph-tool on Mac is probably to use conda or homebrew. Both of those options provide pre-compiled binaries, so installation should (hopefully) be

Re: [graph-tool] Analysing and visualising

2020-04-23 Thread peterhuson
Hi James, I'm wondering how you were able to resolve the error from the X server: > Unable to init server: Could not connect: Connection refused XQuartz is installed, and I know it works because I have been able to forward X applications to it previously using ssh -X. I'm on OSX 10.12 using XQu

Re: [graph-tool] Analysing and visualising

2019-08-16 Thread James Ruffle
Thanks for this. Sorted..! However, I am still struggling to understand how to call and make use of the hierarchical vertexes and edges after running the nSBM. state=gt.minimize_nested_blockmodel_dl(g) I can then pull the levels and calculate their centrality with: l1state = state.levels[1].g

Re: [graph-tool] Analysing and visualising

2019-08-15 Thread Tiago de Paula Peixoto
Am 07.08.19 um 14:20 schrieb James Ruffle: > Hi Tiago, > > Thanks for this. > > Unfortunately my machine seems to fail with calling state.draw() for > interactive visualisation which makes it difficult to understand exactly how > this interacts. > I am running it from the docker image, on macOS

Re: [graph-tool] Analysing and visualising

2019-08-07 Thread James Ruffle
Hi Tiago, Thanks for this. Unfortunately my machine seems to fail with calling state.draw() for interactive visualisation which makes it difficult to understand exactly how this interacts. I am running it from the docker image, on macOS 10.14.16. Following your instructions on installation pag

Re: [graph-tool] Analysing and visualising

2019-08-06 Thread Tiago de Paula Peixoto
Am 05.08.19 um 15:09 schrieb Ruffle, James: > 1) This presumably then needs to be saved as a hvprops(?!). But, I am unclear > how to do this, not least in a way that I know for sure that the correct > hierarchical vertices within l1state and l2state are aligning to the > generated centrality mea