[PATCH] gnu: Add r-survival.

Dear Guix, Here is another R package. Thank you for your time. Kind regards, Roel Janssen >From c7da5f0f490d75fbf9697fc632fb0066dfefa89f Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 9 May 2016 13:28:53 +0200 Subject: [PATCH] gnu: Add r-survival. * gnu

[PATCH] gnu: Add r-zoo.

Dear Guix, There's still a range of R packages I would like to add. Here's another one of them. Thank you for your time. Kind regards, Roel Janssen >From 11a1793ee3f8c9954fae873dc7a6b94412e51b83 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 9 May 2016 13:15

[PATCH] gnu: graphviz: Enable Guile library.

(render my-graph "svg" "/home/roel/my-graph.svg") The patch is fairly straightforward, since all that is needed is include the dependencies to the inputs: >From 8e93c01a9c0909f49c4b644c965824fd5f74527a Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 9 May 2

Re: [PATCH] gnu: Add bash-tap.

Leo Famulari writes: > On Tue, May 03, 2016 at 12:44:57PM +0200, Roel Janssen wrote: >> * gnu/packages/bash.scm (bash-tap): New variable. > >> +(arguments >> + `(#:tests? #f ; There is no test suite. >> + #:phases >> + (modify-phases %

Re: [PATCH] gnu: Add r-mvtnorm.

Leo Famulari writes: > On Wed, May 04, 2016 at 03:46:46PM +0200, Roel Janssen wrote: >> +(license license:gpl2+))) > > I can't find the "or later" text anywhere in the source distribution. > According to some recent guix-devel discussion [0], that's what &g

Re: [PATCH] gnu: Add r-coda.

So, we do need r-lattice when actually using the module.. I attached yet another patch. >From bc85f769c42418b307339aaafb2f3785a7a897e1 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 4 May 2016 15:53:45 +0200 Subject: [PATCH] gnu: Add r-coda. * gnu/packages/stati

[PATCH] gnu: Add r-mvtnorm.

Dear Guix, Yet another patch for an R package. Kind regards, Roel Janssen >From ff2b4d8a0bc1ecf1dcc3a6ce8f3e457910e7aa33 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 4 May 2016 15:45:09 +0200 Subject: [PATCH] gnu: Add r-mvtnorm. * gnu/packages/statistics.scm (

Re: [PATCH] gnu: Add r-coda.

I improved the patch by removing r-lattice because that is not needed, and I made a complete sentence in the description. Here it is: >From aedf6029283733a19941de2d2b641f87790189d3 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 4 May 2016 15:39:18 +0200 Subjec

Re: [PATCH] gnu: Add nlopt.

Alex Kost writes: > Roel Janssen (2016-05-03 23:17 +0300) wrote: > >> I've been submitting most packages this way. Should I align (method >> ...) to the r in origin for all packages in the future? > > Yes, 'method' is a sub-expression or 'origin', not of 'source', an

Re: [PATCH] gnu: Add nlopt.

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> I added your magic for Guile. Here is the patch: >> >>>From 6221baadea331cff7e8ab6b9ea1b3bb7737b227f Mon Sep 17 00:00:00 2001 >> From: Roel Janssen <r...@gnu.org> >> Date: Tue

[PATCH] gnu: Add r-estimability.

Dear Guix, Here's another R package. Kind regards, Roel Janssen >From 97775f169bcd9b81daa19ec7c298698340d5a7b9 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 3 May 2016 15:04:21 +0200 Subject: [PATCH] gnu: Add r-estimability. * gnu/packages/statistics.scm (r-est

[PATCH] gnu: Add r-coda.

Dear Guix, Here's another R package I would like to use with GNU Guix. Thanks for your time. Kind regards, Roel Janssen >From 1308ecf523c5d50bf345df9277e12e03336ce32c Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 3 May 2016 14:43:22 +0200 Subject: [PATCH] g

Re: [PATCH] gnu: Add nlopt.

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> Ludovic Courtès writes: > > [...] > >>> Still, according to luksan/COPYRIGHT, “[s]ubroutines PBUN, PNEW, PVAR, >>> PSEN” are “for your personal use […] [n]ot for redistribution”

Re: Cross-Origin Request blocked when browing non-www of packages page and mixed content

Ludovic Courtès writes: > Hello! > > Roel Janssen <r...@gnu.org> skribis: > >> I noticed that the build status icons don't work when browing: >> https://gnu.org/software/guix/packages/ (Notice the lack of 'www.') >> >> The reason: >> CORS hea

Re: [PATCH] gnu: Add nlopt.

Ludovic Courtès writes: > Hello! > > Roel Janssen <r...@gnu.org> skribis: > >> I think the licensing page on the website is pretty clear: >> http://ab-initio.mit.edu/wiki/index.php/NLopt_License_and_Copyright >> >> From the page: >>> The N

Re: [PATCH] gnu: Add bash-tap.

think using gnu-build-system is the way to go. Here's a patch using the gnu build system: >From 7daef2ee0fdb1aef7344da6ff0afe31efcf41cac Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 3 May 2016 12:43:00 +0200 Subject: [PATCH] gnu: Add bash-tap. * gnu/packages/bash.scm (bash-tap): New

Re: [PATCH] gnu: Add r-limma.

Dear Ricardo, Thanks for your quick response. Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> Dear Guix, >> >> I have two R packages I would like to add. The other package 'r-edger' >> depends on this one. This is the first time I'm atte

Re: [PATCH] gnu: Add freebayes

into this :). Kind regards, Roel Janssen Rob Syme writes: > Hi Ricardo > > I'm sorry for not checking the list beforehand! Interestingly, we ended up > with very different solutions to the problem of including the freebayes > dependencies. Using the recursive git fetch compile

[PATCH] gnu: Add r-edger.

Dear Guix, Here is a package for 'r-edger'. I sent another e-mail with the dependency 'r-limma'. Kind regards, Roel Janssen >From 5f31983e32f381dd5e98c93f8402770196fce4f2 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 3 May 2016 09:26:37 +0200 Subject: [PATCH] g

[PATCH] gnu: Add r-limma.

Dear Guix, I have two R packages I would like to add. The other package 'r-edger' depends on this one. This is the first time I'm attempting an inline patch, so I hope this works out well. Kind regards, Roel Janssen >From 565fa10f9896e1143419b2a2c6496b91a135a930 Mon Sep 17 00:00:00 2001 F

Re: [PATCH] gnu: Add 4store.

Leo Famulari writes: > On Wed, Apr 27, 2016 at 12:47:40AM +0200, Roel Janssen wrote: >> * gnu/packages/databases.scm (4store): New variable. >> * gnu/packages/patches/4store-fix-buildsystem.patch: New file. >> * gnu/local.mk (dist_patch_DATA): Add patch file entry. >

Re: [PATCH] gnu: Add mongodb.

Hello Ludo’, Ludovic Courtès writes: > Hi! > > Roel Janssen <r...@gnu.org> skribis: > >> My reasoning for keeping the third-party libraries in the tarball was >> simply because upstream made that choice. Unbundling can and probably >> will introduce diffe

Re: [PATCH] gnu: Add 4store.

>From e5b0f16d5d6e67d2c1f24729ce7f6490fa284d79 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 27 Apr 2016 00:44:22 +0200 Subject: [PATCH] gnu: Add 4store. * gnu/packages/databases.scm (4store): New variable. * gnu/packages/patches/4store-fix-buildsystem.patch:

Re: [PATCH] gnu: Add xz-java.

>From 8e9997429cb70c04d269516032e7d3b292d5ae95 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 27 Apr 2016 00:00:44 +0200 Subject: [PATCH] gnu: Add java-xz. * gnu/packages/java.scm (java-xz): New variable. --- gnu/packages/java.scm | 30

Re: [PATCH] Add vcflib.

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> From e75aa388931c92657336c8a15f88b6a0273f5e02 Mon Sep 17 00:00:00 2001 >> From: Roel Janssen <r...@gnu.org> >> Date: Tue, 22 Mar 2016 15:01:37 +0100 >> Subject: [PATCH 2/8] g

Re: [PATCH] Add vcflib.

>From 98ed1adae91aca2c118779f5333dc21446f1c720 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 26 Apr 2016 19:48:31 +0200 Subject: [PATCH] gnu: Add intervaltree. * gnu/packages/bioinformatics.scm (intervaltree): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] Add vcflib.

>From 5cc17f0ceca12998a658dcd3cfd7494b137274e1 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 26 Apr 2016 19:28:54 +0200 Subject: [PATCH] gnu: Add tabixpp. * gnu/packages/bioinformatics.scm (tabixpp): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] Add vcflib.

>From cda09da657bd18f21102b65729740b4819589ff9 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 25 Apr 2016 11:17:21 +0200 Subject: [PATCH] gnu: Add filevercmp. * gnu/packages/bioinformatics.scm (filevercmp): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] Add vcflib.

>From 8808f3abda32feca92ec8e2bb403ba705ef4b7b7 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 22 Apr 2016 10:02:37 +0200 Subject: [PATCH] gnu: Add filevercmp. * gnu/packages/bioinformatics.scm (filevercmp): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] Add vcflib.

>From e7d84066efe5857581c1d03be5dfda95c1541462 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 22 Apr 2016 09:35:47 +0200 Subject: [PATCH] gnu: Add multichoose. * gnu/packages/bioinformatics.scm (multichoose): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] Add vcflib.

>From 58ecd585411a8981f7cefdb6928e199ef77de476 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 22 Apr 2016 09:15:52 +0200 Subject: [PATCH] gnu: Add tabixpp. * gnu/packages/bioinformatics.scm (tabixpp): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] gnu: Add Icedtea 3.0.0pre09

Ricardo Wurmus writes: > Ludovic Courtès writes: > >> Ricardo Wurmus skribis: >> >>> Ludovic Courtès writes: >>> Ricardo Wurmus skribis: >> >> [...] >> > Does it make sense to push this patch to master? Or should

Re: [PATCH] Add vcflib.

Dear reviewers, Can I make the review process easier by posting the patches in separate threads? Thanks! Kind regards, Roel Janssen Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> Dear Guix, >> >> In an effort to package freebayes, I

Cross-Origin Request blocked when browing non-www of packages page and mixed content

>From 561e11988d14ed67c359d6294f170199a2fed273 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 20 Apr 2016 10:26:23 +0200 Subject: [PATCH] website: packages: Serve package logos locally. * website/www/packages/scm (package->sxml): Add logos only when found locall

Re: [PATCH] gnu Add r-pracma.

Leo Famulari writes: > On Fri, Apr 08, 2016 at 10:53:24AM +0200, Roel Janssen wrote: >> * gnu/packages/maths.scm (r-pracma): New variable. > > Thanks for the patch! > > I applied it as ec8c7e473, adding a colon after "gnu" in the commit > title, and with a

[PATCH] gnu Add r-pracma.

>From a2ed49feb4d1613d13c39922f360a0685a2eef36 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 8 Apr 2016 10:48:58 +0200 Subject: [PATCH] gnu Add r-pracma. * gnu/packages/maths.scm (r-pracma): New variable. --- gnu/packages/maths.scm | 20 +++

Re: [PATCH] gnu: Add nlopt.

>From bb41efffc5258b0fe79b744e96981411b94e6aad Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 7 Apr 2016 22:45:01 +0200 Subject: [PATCH] gnu: Add nlopt. * gnu/packages/maths.scm (nlopt): New variable. --- gnu/packages/maths.scm | 20 1 file ch

Re: [PATCH] gnu: Add nlopt.

>From 224c4e32265dc229663f693759bd1cafa5ee6a20 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 7 Apr 2016 23:18:04 +0200 Subject: [PATCH] gnu: Add nlopt. * gnu/packages/maths.scm (nlopt): New variable. --- gnu/packages/maths.scm | 20 1 file ch

[PATCH] gnu: Add nlopt.

>From 558175f69ba52446eca75ab79b641c8f0204093e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 7 Apr 2016 13:22:35 +0200 Subject: [PATCH] gnu: Add nlopt. * gnu/packages/maths.scm (nlopt): New variable. --- gnu/packages/maths.scm | 20 1 file ch

Re: [PATCH] gnu: vcftools: Update to 0.1.14.

>> From f0cc38ea5ed57018785cc20352165a7e2cd18d84 Mon Sep 17 00:00:00 2001 >> From: Roel Janssen <r...@gnu.org> >> Date: Mon, 4 Apr 2016 20:04:48 +0200 >> Subject: [PATCH] gnu: vcftools: Update to 0.1.14. >> >> * gnu/packages/bioinformatics.scm (vcftools)

Re: [PATCH] gnu: vcftools: Update to 0.1.14.

>From f0cc38ea5ed57018785cc20352165a7e2cd18d84 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 4 Apr 2016 20:04:48 +0200 Subject: [PATCH] gnu: vcftools: Update to 0.1.14. * gnu/packages/bioinformatics.scm (vcftools): Update to 0.1.14. [home-page]: Update to new

Re: [PATCH] gnu: Add xz-java.

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> One minor detail is the filename of the jar. I renamed it to >> "xz-1.5.jar", which I think is the "standard" file naming scheme for our >> Java packages. > > I

[PATCH] gnu: vcftools: Update to 0.1.14.

>From fc68a4593db1449bb8d55a4d8edee0a0fd05ee64 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 4 Apr 2016 14:06:33 +0200 Subject: [PATCH] gnu: vcftools: Update to 0.1.14. * gnu/packages/bioinformatics.scm (vcftools): Update to 0.1.14. [home-page]: Update to new

[PATCH] gnu: Add progress.

>From 1e85ce47b24e40ba17f01cec433d6e445597f81d Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Sat, 2 Apr 2016 21:43:44 +0200 Subject: [PATCH] gnu: Add progress. * gnu/packages/admin.scm (progress): New variable. --- gnu/packages/admin.scm | 29 +++

Re: [PATCH] gnu: Add xz-java.

>From eb4c2cd850626aa6fc88f355964ec4b7f74a2add Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 1 Apr 2016 13:06:21 +0200 Subject: [PATCH] gnu: Add xz-java. * gnu/packages/java.scm (xz-java): New variable. --- gnu/packages/java.scm | 30 +

[PATCH] gnu: Add xz-java.

>From dc0367cf4e3da72e1b1b68ace26216c31e0c6f6c Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 31 Mar 2016 23:27:26 +0200 Subject: [PATCH] gnu: Add xz-java. * gnu/packages/java.scm (xz-java): New variable. --- gnu/packages/java

Re: [PATCH] doc: Small fixes for typos and missing words.

>From 467315651e27c3ce3059b9fca38494879de50e5e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 30 Mar 2016 14:27:52 +0200 Subject: [PATCH] doc: Small fixes for typos and missing words. * doc/guix.texi (The Store Monad): Add a dot at the end of a sentence. (The St

[PATCH] doc: Small fixes for typos and missing words.

>From 467315651e27c3ce3059b9fca38494879de50e5e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 30 Mar 2016 14:27:52 +0200 Subject: [PATCH] doc: Small fixes for typos and missing words. * doc/guix.texi (The Store Monad): Add a dot at the end of a sentence. (The St

Re: [PATCH] gnu: r-devtools: Update to 1.10.0.

>From c1fc1e3c0b4a5d002cf90a5fd43c0a946124a4c6 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 29 Mar 2016 14:30:38 +0200 Subject: [PATCH 1/2] gnu: Add r-withr. * gnu/packages/statistics.scm (r-withr): New variable. --- gnu/packages/statistics

[PATCH] gnu: r-devtools: Update to 1.10.0.

>From 30c0938b1d1239fc1a1c894d6706c4f322395a9e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 29 Mar 2016 14:00:57 +0200 Subject: [PATCH] gnu: r-devtools: Update to 1.10.0. * gnu/packages/statistics.scm (r-devtools): Update to 1.10.0. * gnu/packages/statistics.scm

Re: [PATCH] gnu: Add 4store.

Dear Leo, Thank you for taking the time to review my patch. Leo Famulari writes: > On Wed, Mar 23, 2016 at 03:09:46PM +0100, Roel Janssen wrote: >> * gnu/packages/databases.scm (4store): New variable. >> * gnu/packages/patches/4store-fix-buildsystem.patch: New file. >

[PATCH] gnu: Add 4store.

>From 2366fd58893547e4db6e4350a643a44c056e0902 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 23 Mar 2016 14:58:37 +0100 Subject: [PATCH] gnu: Add 4store. * gnu/packages/databases.scm (4store): New variable. * gnu/packages/patches/4store-fix-buildsystem.patch:

[PATCH] gnu: Add bash-tap.

>From f50ae55cfd2edc513de33b2736f9c3a13cd43532 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 17 Mar 2016 17:03:34 +0100 Subject: [PATCH] gnu: Add bash-tap. * gnu/packages/bash.scm (bash-tap): New variable. --- gnu/packages/bash

Re: HTTPS for Hydra

It looks like we've got that CORS problem again. Did you change the web server configuration at hydra.gnu.org? Kind regards, Roel

Multiple versions of boost.

uestions: - What is the convention with the Scheme variable name for the package? - Should I distinguish the package name in its version? Thank you for your time. Kind regards, Roel Janssen

Re: [PATCH] gnu: Add mongodb.

and their official binaries. I will try to unbundle these libraries from the release tarball. This could take some time though. Again, sorry for the noise. Kind regards, Roel Janssen Thompson, David writes: > Hi Roel, > > 2016-03-17 11:08 GMT-04:00 Roel Janssen <r...@gnu.org>

Re: HTTPS for Hydra

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> It looks like we've got that CORS problem again. > > What makes you say so? The "web console" in Firefox reported so. However, I cannot reproduce that anymore. :) >> Did

[PATCH] gnu: Add r-dnacopy.

>From fab3c04392c943d651c4fcc922bea878092ecab7 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 16 Mar 2016 10:27:48 +0100 Subject: [PATCH] gnu: Add r-dnacopy. * gnu/packages/bioinformatics.scm (r-dnacopy): New variable. --- gnu/packages/bioinformatics

[PATCH] licenses: Add Apache Software License 1.1.

>From 02888e1aa137142a2a5ad9edc400df04514e7e3d Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 16 Mar 2016 08:50:23 +0100 Subject: [PATCH] licenses: Add Apache Software License 1.1. * guix/licenses.scm (asl1.1): New variables. --- guix/licenses.scm | 7 ++

Re: HTTPS for Hydra

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> From 28cfe3d56d2139fc4a50ac9b20b2a73fe12f5a6c Mon Sep 17 00:00:00 2001 >> From: Roel Janssen <r...@gnu.org> >> Date: Tue, 15 Mar 2016 22:45:32 +0100 >> Subject: [PATCH] website: pack

Re: HTTPS for Hydra

>From 28cfe3d56d2139fc4a50ac9b20b2a73fe12f5a6c Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 15 Mar 2016 22:45:32 +0100 Subject: [PATCH] website: packages: Support both http and https requests to hydra.gnu.org. * website/static/base/js/packages.js (set_build_sta

Re: [PATCH] Add ant-build-system.

Ricardo Wurmus writes: >> OK with these changes! > > Thanks. I performed the requested changes (including a fix to > “reset-timestamps” to include directories). Pushed as 5f7a1a4. Great to see this. Thanks!

Re: [PATCH] gnu: Add bioawk.

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > > >>>> + (replace >>>> + 'install >>> >>> Please put “'install” on the same line as “(replace”. >> >> Should I do this for other (replace

Re: [PATCH] gnu: Add Icedtea 3.0.0pre09

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> Thanks a lot for this patch. I succesfully upgraded the icedtea-7 to >> icedtea-8 package by modifying: (define-public icedtea icedtea-8). >> >> Then I succesfully compiled Picard wit

Re: [PATCH] gnu: Add Icedtea 3.0.0pre09

Hello Ricardo, Thanks a lot for this patch. I succesfully upgraded the icedtea-7 to icedtea-8 package by modifying: (define-public icedtea icedtea-8). Then I succesfully compiled Picard with ant and icedtea-8 from Guix. So.. it works! Thanks again for your work on all things Java, Roel

Re: [PATCH] gnu: Add bioawk.

>From ec580c06e33de844f6f6cb7c4fc3b44691e141fd Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 10 Mar 2016 23:54:31 +0100 Subject: [PATCH] gnu: Add bioawk. * gnu/packages/bioinformatics.scm (bioawk): New variable. --- gnu/packages/bioinformatics

[PATCH] gnu: emacs: Use libotf.

>From ae2b6e20acce65c6b281ae5a2670b0e3b8b81335 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 10 Mar 2016 22:21:23 +0100 Subject: [PATCH] gnu: emacs: Use libotf. * gnu/packages/emacs.scm (emacs): Compile with libotf support. --- gnu/packages/emacs.scm | 2 +

Re: [PATCH] gnu: Add freebayes.

Leo Famulari writes: > On Wed, Mar 09, 2016 at 07:53:20AM +0100, Pjotr Prins wrote: >> On Tue, Mar 08, 2016 at 04:44:13PM +0100, Roel Janssen wrote: >> > One of the problems with the patch is probably the bulk of dependencies >> > dragged in (for example, vcflib). Th

[PATCH] gnu: Add bioawk.

>From 990eda92a62dc25d0f5792437a82e119c5e3579f Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 8 Mar 2016 21:06:53 +0100 Subject: [PATCH] gnu: Add bioawk. * gnu/packages/bioinformatics.scm (bioawk): New variable. --- gnu/packages/bioinformatics

Re: [PATCH] gnu: Add cppcheck.

>From 543a8db3f7cee85968c140ee28f047383f89593a Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 2 Mar 2016 14:42:16 +0100 Subject: [PATCH] gnu: Add cppcheck. * gnu/packages/check.scm (cppcheck): New variable. --- gnu/packages/check.scm | 22 +

[PATCH] gnu: Add cppcheck.

>From 28ed436f0fdd45a4602503f394603e27e462b20e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Wed, 2 Mar 2016 13:29:10 +0100 Subject: [PATCH] gnu: cppcheck: Add cppcheck. * gnu/packages/check.scm (cppcheck): Add variable. --- gnu/packages/check.scm | 20 ++

Re: [PATCH] Add rdmd.

Leo Famulari writes: > On Mon, Feb 22, 2016 at 10:01:39PM +0100, Roel Janssen wrote: >> * gnu/packages/ldc.scm (rdmd): New variable. > > Thanks! > > I updated your copyright line for the new year, made a minor adjustment > to the version string (specificying the Gu

Re: [PATCH] Add rdmd.

>From d6a457ed3dfceb65e1333ef943ed09d88b8385d2 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 22 Feb 2016 21:51:43 +0100 Subject: [PATCH] gnu: Add rdmd. * gnu/packages/ldc.scm (rdmd): New variable. --- gnu/packages/ldc

Re: [PATCH] Add rdmd.

>From beec39d6bdc2489fb4b0eb17e59e44d848178436 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 22 Feb 2016 19:49:24 +0100 Subject: [PATCH] gnu: Add rdmd. * gnu/packages/ldc.scm (rdmd): New variable. --- gnu/packages/ldc

Re: [PATCH] Add rdmd.

>From 67222c11f6bb8d07b798b1f50eae6e23d8e77b2b Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 22 Feb 2016 14:00:53 +0100 Subject: [PATCH] gnu: Add rdmd. * gnu/packages/ldc.scm (rdmd): New variable. --- gnu/packages/ldc

[PATCH] Add rdmd.

>From b1de0922ef8add641256027a8cd0dfb1de57406a Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 22 Feb 2016 12:23:53 +0100 Subject: [PATCH] gnu: Add rdmd. * gnu/packages/ldc.scm (rdmd): New variable. --- gnu/packages/ldc

Re: 01/01: gnu: Add libotf.

>From e10c0a6da69bce2886f05b1e0027df962c663e67 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 22 Feb 2016 10:33:10 +0100 Subject: [PATCH] gnu: libotf: Use mirror. * gnu/packages/fontutils.scm (libotf): Use the mirror prefix instead of the full URL. --- gnu

Re: [PATCH] Add libotf.

>From 96b52535da247b6c461612e3789cd22d8c6dd66a Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Fri, 19 Feb 2016 12:32:15 +0100 Subject: [PATCH] gnu: Add libotf. * gnu/packages/fontutils.scm (libotf): New variable. --- gnu/packages/fontutils.scm | 22

HTTPS for Hydra

Dear list, I would like to propose adding HTTPS support for hydra.gnu.org. The direct need to have this set up, is to allow the build status icons to load on the packages page of the Guix website. Fortunately, this should be possible without causing a lot of trouble because Hydra uses nginx as

Re: Adding build status to the package list table

Ricardo Wurmus writes: > Ludovic Courtès <l...@gnu.org> writes: > >> Roel Janssen <r...@gnu.org> skribis: >> >>> We need to add the following line to the response header at >>> hydra.gnu.org: >>> >>> Access-Control-Allow-Or

Re: Adding build status to the package list table

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> Ludovic Courtès writes: > > [...] > >>> Good! I applied the patch and deployed the new web page: >>> >>> https://www.gnu.org/software/guix/packages/ >>> >&

Re: Adding build status to the package list table

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> Ludovic Courtès writes: >> >>> Roel Janssen <r...@gnu.org> skribis: > > [...] > >>>> We might need to add a HTTP header from the GNU server to allow >>>>

Re: [PATCH] Add LDC.

>From 2a07b6ca221a6466d05fcc434331748b80dc3809 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 5 Jan 2016 15:43:50 +0100 Subject: [PATCH] gnu: Add LDC. * gnu/packages/ldc.scm: New file. * gnu/packages/patches/ldc-disable-tests.patch: New file. * gnu-

Re: [PATCH] Add LDC.

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> Thanks again for your time and helpful response. I hope this version of >> the patch is fine. > > It is :) Thanks for your patience! > >> It is the Boost Software License v1. So I peeked

Re: Adding build status to the package list table

>From 738c4035b3f8978622e96c83c9bd7b9679ce747c Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 4 Jan 2016 21:05:02 +0100 Subject: [PATCH] website: packages: Add build status icons in the expanded view. * website/www/packages.scm (package->sxml): Wrap the build

Re: [PATCH] Add LDC.

>From 966a694d19450aa11bf668d7f28ce1bb31c61d7a Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Mon, 4 Jan 2016 15:14:27 +0100 Subject: [PATCH] gnu: Add LDC. * gnu/packages/ldc.scm: New file. * gnu/packages/patches/ldc-disable-tests.patch: New file. * gnu-

[PATCH] Add LDC.

>From 02ac3c5d71e16dc0851018e04aec817e86c8597c Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 29 Dec 2015 12:06:25 +0100 Subject: [PATCH] gnu: add LDC. * gnu/packages/dlanguage.scm (ldc): New variable. * gnu/packages/patches/ldc-disable-tests.patch: New fi

Re: Circular dependency with LDC and Phobos

Pjotr Prins writes: > We are trying to build the LLVM D-compiler (ldc). The problem is a > circular dependency on a D-library (Phobos). The D-compiler source > won't compile without the Phobos sources which are in a separate > repository. Normally it is handled by git --recurse, but I think it >

[PATCH] Add libconfig.

>From a21ebd71a39bf5000e5809514f0e00185311795d Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 10 Dec 2015 14:45:47 +0100 Subject: [PATCH] gnu: Add libconfig. * gnu/packages/libconfig.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. --- gnu-

Re: [PATCH] Add libconfig.

Ricardo Wurmus writes: > Roel Janssen <r...@gnu.org> writes: > >> Sorry about creating yet another file. I looked at filenames to find a >> place to put this in, but I hadn't looked careful enough it seems. I >> think this fits in 'textutils.scm' indeed. The u

Re: [PATCH] Add libconfig.

>From 72e065fc7c8012508ee8ac2963ac25a7c173d33f Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Thu, 10 Dec 2015 16:15:04 +0100 Subject: [PATCH] gnu: Add libconfig. * gnu/packages/textutils.scm (libconfig): New variable. --- gnu/packages/textutils

Re: Adding build status to the package list table

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> I've attached a patch that adds status icons to the links in the >> expanded view. It only loads when the user clicks on "expand". > > This is great! > > Minor things: I would mo

Re: Adding build status to the package list table

>From a37d4ff3d0a0abe676ce7458d11f8797d6bd30ac Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 24 Nov 2015 14:08:34 +0100 Subject: [PATCH] website: packages: Add build status icons in the expanded view. * website/www/packages.scm (package->sxml): Wrap the build

Re: Adding build status to the package list table

Mark H Weaver writes: > Roel Janssen <r...@gnu.org> writes: > >> Eric Bavier writes: >> >>> On 2015-11-19 13:57, Mark H Weaver wrote: >>>> Roel Janssen <r...@gnu.org> writes: >>>> >>>>> The list of packages

Re: Adding build status to the package list table

Ludovic Courtès writes: > Roel Janssen <r...@gnu.org> skribis: > >> The list of packages included in Guix [1] provides links to the build >> status of each package in the details. I would like to provide this >> information in a column after "Package details&q

Re: Adding build status to the package list table

Eric Bavier writes: > On 2015-11-19 13:57, Mark H Weaver wrote: >> Roel Janssen <r...@gnu.org> writes: >> >>> The list of packages included in Guix [1] provides links to the build >>> status of each package in the details. I would like to provide this >

Adding build status to the package list table

he artwork repository to generate a fourth column on the table. WDYT? Kind regards, Roel Janssen [1]: https://www.gnu.org/software/guix/package-list.html [2]: https://lists.gnu.org/archive/html/guix-devel/2015-09/msg00468.html

[PATCH] gnu: Add inklingreader

>From 7cd292fdb46637858e4eaedd3570b607b5087720 Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 10 Nov 2015 15:01:33 +0100 Subject: [PATCH] gnu: Add inklingreader * gnu-system.am: Add the package to GNU_SYSTEM_MODULES. * gnu/packages/inklingreader.scm: The package de

Re: [PATCH] gnu: Add inklingreader

m fine with putting it in 'graphics.scm', but I don't think it belongs there. (Correct me if I'm wrong, I'm new to Guix ;) >> From 7cd292fdb46637858e4eaedd3570b607b5087720 Mon Sep 17 00:00:00 2001 >> From: Roel Janssen <r...@gnu.org> >> Date: Tue, 10 Nov 2015 15:01:33 +010

Re: [PATCH] gnu: Add inklingreader

>From 1cda4dd832a4c654cca7eff150217305ba60573e Mon Sep 17 00:00:00 2001 From: Roel Janssen <r...@gnu.org> Date: Tue, 10 Nov 2015 19:38:42 +0100 Subject: [PATCH] gnu: Add inklingreader. * gnu/packages/inklingreader.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. --- gnu-

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