Re: [outreach] Help trying to create R package

2018-11-02 Thread Laura Lazzati
Thank you :) Ok, i'll move to the texinfo task. Regards! Laura

Re: [outreach] Help trying to create R package

2018-11-02 Thread Gábor Boskovits
Hello Laura, Laura Lazzati ezt írta (időpont: 2018. nov. 2., P, 20:45): >> >> >> I tracked it down: >> >> The cause is that: >> >> guix/import/cran.scm: >> >> (define (latest-bioconductor-package-version name) >> "Return the version string corresponding to the latest release of the >>

Re: [outreach] Help trying to create R package

2018-11-02 Thread Laura Lazzati
> > > I tracked it down: > > The cause is that: > > guix/import/cran.scm: > > (define (latest-bioconductor-package-version name) > "Return the version string corresponding to the latest release of the > bioconductor package NAME, or #F if the package is unknown." > > actually returns #f. It's a

Re: [outreach] Help trying to create R package

2018-10-20 Thread Ludovic Courtès
Hello! Björn Höfling skribis: > On Fri, 19 Oct 2018 20:10:03 -0300 > Laura Lazzati wrote: > > >> I ended up sending the patch in plain text mode directly from my >> email, because even I installed the send-mail command for git, my >> second factor authenticator complained. I will take a look

Re: [outreach] Help trying to create R package

2018-10-20 Thread Laura Lazzati
On Sat, Oct 20, 2018 at 3:34 AM Gábor Boskovits wrote: > > Hello Laura, > > Björn Höfling ezt írta (időpont: > 2018. okt. 20., Szo, 8:08): > > > > Hi Laura, > > > > On Fri, 19 Oct 2018 20:10:03 -0300 > > Laura Lazzati wrote: > > > > > > > I ended up sending the patch in plain text mode directly

Re: [outreach] Help trying to create R package

2018-10-20 Thread Gábor Boskovits
Hello Laura, Björn Höfling ezt írta (időpont: 2018. okt. 20., Szo, 8:08): > > Hi Laura, > > On Fri, 19 Oct 2018 20:10:03 -0300 > Laura Lazzati wrote: > > > > I ended up sending the patch in plain text mode directly from my > > email, because even I installed the send-mail command for git, my >

Re: [outreach] Help trying to create R package

2018-10-20 Thread Björn Höfling
Hi Laura, On Fri, 19 Oct 2018 20:10:03 -0300 Laura Lazzati wrote: > I ended up sending the patch in plain text mode directly from my > email, because even I installed the send-mail command for git, my > second factor authenticator complained. I will take a look about how > to configure the

Re: [outreach] Help trying to create R package

2018-10-19 Thread Laura Lazzati
On Fri, Oct 19, 2018 at 6:25 PM Gábor Boskovits wrote: > > Hello Laura, > > Laura Lazzati ezt írta (időpont: 2018. > okt. 19., P, 22:35): > > > > On Fri, Oct 19, 2018 at 3:45 PM Gábor Boskovits wrote: > > > > > > Hello Laura, > > > > > > Laura Lazzati ezt írta (időpont: 2018. > > > okt. 19.,

Re: [outreach] Help trying to create R package

2018-10-19 Thread Gábor Boskovits
Hello Laura, Laura Lazzati ezt írta (időpont: 2018. okt. 19., P, 22:35): > > On Fri, Oct 19, 2018 at 3:45 PM Gábor Boskovits wrote: > > > > Hello Laura, > > > > Laura Lazzati ezt írta (időpont: 2018. > > okt. 19., P, 20:37): > > > > > > On Fri, Oct 19, 2018 at 4:29 AM Gábor Boskovits > > >

Re: [outreach] Help trying to create R package

2018-10-19 Thread Laura Lazzati
On Fri, Oct 19, 2018 at 3:45 PM Gábor Boskovits wrote: > > Hello Laura, > > Laura Lazzati ezt írta (időpont: 2018. > okt. 19., P, 20:37): > > > > On Fri, Oct 19, 2018 at 4:29 AM Gábor Boskovits wrote: > > > > > > Hello Ricardo, > > > > > > Ricardo Wurmus ezt írta (időpont: 2018. okt. 19., P >

Re: [outreach] Help trying to create R package

2018-10-19 Thread Gábor Boskovits
Hello Laura, Laura Lazzati ezt írta (időpont: 2018. okt. 19., P, 20:37): > > On Fri, Oct 19, 2018 at 4:29 AM Gábor Boskovits wrote: > > > > Hello Ricardo, > > > > Ricardo Wurmus ezt írta (időpont: 2018. okt. 19., P > > 9:10): > >> > >> > >> Hi Laura, > >> > >> > with guix environment --pure

Re: [outreach] Help trying to create R package

2018-10-19 Thread Laura Lazzati
On Fri, Oct 19, 2018 at 4:29 AM Gábor Boskovits wrote: > > Hello Ricardo, > > Ricardo Wurmus ezt írta (időpont: 2018. okt. 19., P > 9:10): >> >> >> Hi Laura, >> >> > with guix environment --pure guix --ad-hoc coreutils findutils which (or >> > -C) >> > I get, the output: >> > Command

Re: [outreach] Help trying to create R package

2018-10-19 Thread Gábor Boskovits
Hello Ricardo, Ricardo Wurmus ezt írta (időpont: 2018. okt. 19., P 9:10): > > Hi Laura, > > > with guix environment --pure guix --ad-hoc coreutils findutils which (or > -C) > > I get, the output: > > Command 'lesspipe' is available in the following places > > * /bin/lesspipe > > *

Re: [outreach] Help trying to create R package

2018-10-19 Thread Ricardo Wurmus
Hi Laura, > with guix environment --pure guix --ad-hoc coreutils findutils which (or -C) > I get, the output: > Command 'lesspipe' is available in the following places > * /bin/lesspipe > * /usr/bin/lesspipe > The command could not be located because '/bin:/usr/bin' is not > included in the

Re: [outreach] Help trying to create R package

2018-10-19 Thread Gábor Boskovits
Helllo Laura, Laura Lazzati ezt írta (időpont: 2018. okt. 19., P, 5:48): > > On Thu, Oct 18, 2018 at 10:05 PM Laura Lazzati > wrote: > > > > On Thu, Oct 18, 2018 at 3:17 PM Laura Lazzati > > wrote: > > > > > > On Thu, Oct 18, 2018 at 3:15 PM Ricardo Wurmus wrote: > > > > > > > > > > > > Hi

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 10:05 PM Laura Lazzati wrote: > > On Thu, Oct 18, 2018 at 3:17 PM Laura Lazzati > wrote: > > > > On Thu, Oct 18, 2018 at 3:15 PM Ricardo Wurmus wrote: > > > > > > > > > Hi Laura, > > > > > > > configure: checking for guile 2.2 > > > > configure: found guile 2.2 > > > >

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 3:17 PM Laura Lazzati wrote: > > On Thu, Oct 18, 2018 at 3:15 PM Ricardo Wurmus wrote: > > > > > > Hi Laura, > > > > > configure: checking for guile 2.2 > > > configure: found guile 2.2 > > > checking for guile-2.2... /usr/bin/guile-2.2 > > > checking for Guile version >=

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 3:15 PM Ricardo Wurmus wrote: > > > Hi Laura, > > > configure: checking for guile 2.2 > > configure: found guile 2.2 > > checking for guile-2.2... /usr/bin/guile-2.2 > > checking for Guile version >= 2.2... 2.2.3 > > checking for guild-2.2... no > > checking for

Re: [outreach] Help trying to create R package

2018-10-18 Thread Ricardo Wurmus
Hi Laura, > configure: checking for guile 2.2 > configure: found guile 2.2 > checking for guile-2.2... /usr/bin/guile-2.2 > checking for Guile version >= 2.2... 2.2.3 > checking for guild-2.2... no > checking for guile-config-2.2... no > checking for guile-tools-2.2... no > configure: error:

Re: [outreach] Help trying to create R package

2018-10-18 Thread Björn Höfling
On Thu, 18 Oct 2018 14:26:50 -0300 Laura Lazzati wrote: > On Thu, Oct 18, 2018 at 1:18 PM Laura Lazzati > wrote: > > > > On Thu, Oct 18, 2018 at 12:40 PM Gábor Boskovits > > wrote: > > > > > > Laura Lazzati ezt írta (időpont: > > > 2018. okt. 18., Cs, 17:26): > > > > > > > > On Thu, Oct

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 1:18 PM Laura Lazzati wrote: > > On Thu, Oct 18, 2018 at 12:40 PM Gábor Boskovits wrote: > > > > Laura Lazzati ezt írta (időpont: 2018. > > okt. 18., Cs, 17:26): > > > > > > On Thu, Oct 18, 2018 at 12:15 PM Gábor Boskovits > > > wrote: > > > > > > > > Hi Laura, > > > >

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 12:40 PM Gábor Boskovits wrote: > > Laura Lazzati ezt írta (időpont: 2018. > okt. 18., Cs, 17:26): > > > > On Thu, Oct 18, 2018 at 12:15 PM Gábor Boskovits > > wrote: > > > > > > Hi Laura, > > > > > > Laura Lazzati ezt írta (időpont: 2018. > > > okt. 18., Cs, 16:49): >

Re: [outreach] Help trying to create R package

2018-10-18 Thread Gábor Boskovits
Laura Lazzati ezt írta (időpont: 2018. okt. 18., Cs, 17:26): > > On Thu, Oct 18, 2018 at 12:15 PM Gábor Boskovits wrote: > > > > Hi Laura, > > > > Laura Lazzati ezt írta (időpont: 2018. > > okt. 18., Cs, 16:49): > > > > > > On Thu, Oct 18, 2018 at 4:50 AM Gábor Boskovits > > > wrote: > > > >

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 12:15 PM Gábor Boskovits wrote: > > Hi Laura, > > Laura Lazzati ezt írta (időpont: 2018. > okt. 18., Cs, 16:49): > > > > On Thu, Oct 18, 2018 at 4:50 AM Gábor Boskovits wrote: > > > > > > Wow, Björn, you were so fast again :) > > > > > > I just got around this right now.

Re: [outreach] Help trying to create R package

2018-10-18 Thread Gábor Boskovits
Hi Laura, Laura Lazzati ezt írta (időpont: 2018. okt. 18., Cs, 16:49): > > On Thu, Oct 18, 2018 at 4:50 AM Gábor Boskovits wrote: > > > > Wow, Björn, you were so fast again :) > > > > I just got around this right now. > Again, thank both for being so kind :) > > > > Björn Höfling ezt írta

Re: [outreach] Help trying to create R package

2018-10-18 Thread Laura Lazzati
On Thu, Oct 18, 2018 at 4:50 AM Gábor Boskovits wrote: > > Wow, Björn, you were so fast again :) > > I just got around this right now. Again, thank both for being so kind :) > > Björn Höfling ezt írta (időpont: > 2018. okt. 18., Cs, 8:54): > > > > Hi Laura, > > > > On Wed, 17 Oct 2018 22:36:02

Re: [outreach] Help trying to create R package

2018-10-18 Thread Gábor Boskovits
Wow, Björn, you were so fast again :) I just got around this right now. Björn Höfling ezt írta (időpont: 2018. okt. 18., Cs, 8:54): > > Hi Laura, > > On Wed, 17 Oct 2018 22:36:02 -0300 > Laura Lazzati wrote: > > > > >

Re: [outreach] Help trying to create R package

2018-10-18 Thread Björn Höfling
Hi Laura, On Wed, 17 Oct 2018 22:36:02 -0300 Laura Lazzati wrote: > > https://www.gnu.org/software/guix/manual/en/html_node/Contributing.html#Contributing > > > I have already read this chapter, but I am messed up. I have already > cloned from git, but I have some questions: > 1) Do I need

Re: [outreach] Help trying to create R package

2018-10-17 Thread Laura Lazzati
On Wed, Oct 17, 2018 at 2:13 PM Clément Lassieur wrote: > > Hi Laura, > > Laura Lazzati writes: > > > You were right. I took a look at my .bashrc file, and I had an: > > export PATH="/home/laura/.guix-profile/bin${PATH:+:}$PATH" > > I ran $guix pull, did the PATH export in my CLI, then checked

Re: [outreach] Help trying to create R package

2018-10-17 Thread Clément Lassieur
Hi Laura, Laura Lazzati writes: > You were right. I took a look at my .bashrc file, and I had an: > export PATH="/home/laura/.guix-profile/bin${PATH:+:}$PATH" > I ran $guix pull, did the PATH export in my CLI, then checked the output of > $which guix, that was the same that was mentioned by

Re: [outreach] Help trying to create R package

2018-10-17 Thread Laura Lazzati
On Wed, Oct 17, 2018 at 11:27 AM Laura Lazzati wrote: > > On Wed, Oct 17, 2018 at 5:21 AM Gábor Boskovits wrote: > > > > ÜHi Laura, > > > > > > > > Björn Höfling ezt írta (időpont: 2018. > > okt. 17., Sze 9:17): > >> > >> Hi Laura, > >> > >> On Tue, 16 Oct 2018 22:01:58 -0300 > >> Laura

Re: [outreach] Help trying to create R package

2018-10-17 Thread Laura Lazzati
On Wed, Oct 17, 2018 at 5:21 AM Gábor Boskovits wrote: > > ÜHi Laura, > > > > Björn Höfling ezt írta (időpont: 2018. > okt. 17., Sze 9:17): >> >> Hi Laura, >> >> On Tue, 16 Oct 2018 22:01:58 -0300 >> Laura Lazzati wrote: >> >> > On Tue, Oct 16, 2018 at 7:19 PM Björn Höfling >> > wrote: >> > >

Re: [outreach] Help trying to create R package

2018-10-17 Thread Gábor Boskovits
ÜHi Laura, Björn Höfling ezt írta (időpont: 2018. okt. 17., Sze 9:17): > Hi Laura, > > On Tue, 16 Oct 2018 22:01:58 -0300 > Laura Lazzati wrote: > > > On Tue, Oct 16, 2018 at 7:19 PM Björn Höfling > > wrote: > > > > > > Hi Laura, > > Hi! I had not answered yet because I thought I would be

Re: [outreach] Help trying to create R package

2018-10-17 Thread Björn Höfling
Hi Laura, On Tue, 16 Oct 2018 22:01:58 -0300 Laura Lazzati wrote: > On Tue, Oct 16, 2018 at 7:19 PM Björn Höfling > wrote: > > > > Hi Laura, > Hi! I had not answered yet because I thought I would be too verbose. > If so, please do a Laura -v instead of Laura -vvv. > Thanks for writing :)

Re: [outreach] Help trying to create R package

2018-10-16 Thread Laura Lazzati
On Tue, Oct 16, 2018 at 7:19 PM Björn Höfling wrote: > > Hi Laura, Hi! I had not answered yet because I thought I would be too verbose. If so, please do a Laura -v instead of Laura -vvv. Thanks for writing :) it encourages me a lot. > > On Tue, 16 Oct 2018 10:13:23 -0300 > Laura Lazzati

Re: [outreach] Help trying to create R package

2018-10-16 Thread Björn Höfling
Hi Laura, On Tue, 16 Oct 2018 10:13:23 -0300 Laura Lazzati wrote: [importing problems ...] Could you solve your certificate-problem? Have you been successfully in importing a package? Unfortunately the package of your choice is already part of guix: $ guix package -s "rtracklayer$" name:

Re: [outreach] Help trying to create R package

2018-10-16 Thread Laura Lazzati
On Tue, Oct 16, 2018 at 5:29 AM Gábor Boskovits wrote: > > Hello Björn, > > Björn Höfling ezt írta (időpont: > 2018. okt. 16., K, 8:24): > > > > On Tue, 16 Oct 2018 07:44:12 +0200 > > Björn Höfling wrote: > > > > > Hi Laura, > > > > > > On Mon, 15 Oct 2018 19:47:38 -0300 > > > Laura Lazzati

Re: [outreach] Help trying to create R package

2018-10-16 Thread Gábor Boskovits
Hello Björn, Björn Höfling ezt írta (időpont: 2018. okt. 16., K, 8:24): > > On Tue, 16 Oct 2018 07:44:12 +0200 > Björn Höfling wrote: > > > Hi Laura, > > > > On Mon, 15 Oct 2018 19:47:38 -0300 > > Laura Lazzati wrote: > > > > > I've reading the documentation as well as trying some commands,and

Re: [outreach] Help trying to create R package

2018-10-16 Thread Björn Höfling
On Tue, 16 Oct 2018 07:44:12 +0200 Björn Höfling wrote: > Hi Laura, > > On Mon, 15 Oct 2018 19:47:38 -0300 > Laura Lazzati wrote: > > > I've reading the documentation as well as trying some commands,and > > there are some problems I am facing. I don't know what I am doing > > wrong. > > > >

Re: [outreach] Help trying to create R package

2018-10-15 Thread Björn Höfling
Hi Laura, On Mon, 15 Oct 2018 19:47:38 -0300 Laura Lazzati wrote: > I've reading the documentation as well as trying some commands,and > there are some problems I am facing. I don't know what I am doing > wrong. > > First, I ran: > $ guix package -s r-* | recsel -p name >> >

Re: [outreach] Help trying to create R package

2018-10-15 Thread Laura Lazzati
Hi! I don't know why when I reppied to all in my last mail some of you were not included On Sat, Oct 13, 2018 at 9:40 PM Laura Lazzati wrote: > > On Sat, Oct 13, 2018 at 3:25 PM Catonano wrote: > > > > Hi Laura ! > > > > Il giorno sab 13 ott 2018 alle ore 15:37 Laura Lazzati > > ha scritto: >

Re: [outreach] Help trying to create R package

2018-10-13 Thread Laura Lazzati
On Sat, Oct 13, 2018 at 3:25 PM Catonano wrote: > > Hi Laura ! > > Il giorno sab 13 ott 2018 alle ore 15:37 Laura Lazzati > ha scritto: > > > > Hi! > > I'm creating a new thread so that it does not end up messy. > > I am reading about defining new packages, and since I have always > >

Re: [outreach] Help trying to create R package

2018-10-13 Thread Catonano
Hi Laura ! Il giorno sab 13 ott 2018 alle ore 15:37 Laura Lazzati < laura.lazzati...@gmail.com> ha scritto: > > Hi! > I'm creating a new thread so that it does not end up messy. > I am reading about defining new packages, and since I have always > installed R with apt, I am trying to do so with

Re: [outreach] Help trying to create R package

2018-10-13 Thread Gábor Boskovits
Hello Laura, Laura Lazzati ezt írta (időpont: 2018. okt. 13., Szo, 15:37): > > Hi! > I'm creating a new thread so that it does not end up messy. > I am reading about defining new packages, and since I have always > installed R with apt, I am trying to do so with ./configure make make > install