Re: [PATCH] gnu: Add darkhttpd.

2016-09-09 Thread Arun Isaac
> Can you send an updated patch? Sure, I'll make the changes and send an updated patch soon.

Re: [PATCH] gnu: Add seqtk.

2016-09-09 Thread Ben Woodcroft
On 09/09/16 22:37, Marius Bakke wrote: Ben Woodcroft writes: Well, despite the lightness of my touch, it seems the licensing is in now in order. I've updated the package, here's an updated patch. Better? I don't think this was intended to be a commit message? :)

[PATCH 3/3] gnu: vlc: Add inputs.

2016-09-09 Thread Alex Vong
>From b9e30604e432586c89c5e33b27ba609852efd399 Mon Sep 17 00:00:00 2001 From: Alex Vong Date: Tue, 30 Aug 2016 02:30:57 +0800 Subject: [PATCH 3/3] gnu: vlc: Add inputs. * gnu/packages/video.scm (vlc)[inputs]: Add eudev, faad2, fluidsynth, gnome-vfs, gst-plugins-base,

[PATCH 2/3] gnu: vlc: Add configure flags.

2016-09-09 Thread Alex Vong
>From 066bee5d7795c6caf2376be4a38e2cf0b397ef98 Mon Sep 17 00:00:00 2001 From: Alex Vong Date: Sat, 10 Sep 2016 00:32:03 +0800 Subject: [PATCH 2/3] gnu: vlc: Add configure flags. * gnu/packages/video.scm (vlc)[arguments]: Add configure flags to enable most fast-math

[PATCH 1/3] gnu: vlc: Add liba52 as inputs.

2016-09-09 Thread Alex Vong
Hi, I split the patches into 3 parts following David's suggestion. The first patch removes the old FIXME by adding liba52 as inputs. The second patch adds some configure flags. The third patch adds many new inputs. Regarding Efraim's concern of closure size, the old closure size is 1459.3 MiB,

Re: [PATCH] gnu: vlc: Add inputs.

2016-09-09 Thread Alex Vong
David Craven writes: >> Sorry, I don't understand what do you mean by libinput-minimal? I didn't >> add any packages with a "-minial" suffice. As for the necessities of >> those dependencies, those dependencies are added one by one. The >> procedure is as followed: >> 1. I build

[PATCH] gnu: icedtea-8: Hardcode dynamically loaded libraries.

2016-09-09 Thread 宋文武
The previous patch failed with icedtea-6, which has uncatched 'decoding-error' in addition to 'encoding-error'. And it seems that only icedtea-8 needs patch, since in icedtea-7 the USE_SYSTEM_GTK, USE_SYSTEM_FONTCONFIG, etc make it links with those libraries instead of dlopen them. So, now only

Re: v2: OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Leo Famulari
On Sat, Sep 10, 2016 at 12:34:39AM +0200, Ludovic Courtès wrote: > > Please see attached. These patches should be applied on top of the > > patches in the email that I am replying to. > > The patches in question LGTM. > > > From a357edf0f568acf937f2cd9f0e97269221aee3f2 Mon Sep 17 00:00:00 2001 >

[PATCH] 1/1 gnu: Add guile-graph

2016-09-09 Thread Dylan Jeffers
>From fc183108bfc3a62a002c8bf99466756fd13b61bf Mon Sep 17 00:00:00 2001 From: Dylan Jeffers Date: Fri, 9 Sep 2016 16:37:17 -0700 Subject: [PATCH] gnu: Add guile-graph. * gnu/packages/guile.scm (guile-graph): New variable. --- gnu/packages/guile.scm | 36

Re: Linux kernel

2016-09-09 Thread David Craven
> Seems we already discussed some of these, no? Ah yes, I missed this, sorry - No need to comment on this patch again: >> Important note: (%current-target-system) returns a GNU triplet such as >> “arm-linux-gnueabihf”, whereas (%current-system) returns a “system type” >> such as “armhf-linux”.

Re: [PATCH] services: nginx: Actually check if configuration is valid.

2016-09-09 Thread Ludovic Courtès
Hello, "Thompson, David" skribis: > I mean that it should throw an error before the system is made active. > The derivation that builds the service file should fail. Not > suggesting it needs to be done right now, but I think it would be > cool. Yup. Running “nginx

Re: [PATCH] services: nginx: Actually check if configuration is valid.

2016-09-09 Thread Ludovic Courtès
Tobias Geerinckx-Rice skribis: > * gnu/services/web.scm (nginx-activation): Fix path to nginx binary. OK to push! :-) Ludo'.

Re: bug#24188: gnucash needs gtk+ in propagated-inputs

2016-09-09 Thread Ludovic Courtès
Arun Isaac skribis: >>> To actually fix this package (and some others) we can: >>> >>> - Wrap them with shared-mime-info in XDG_DATA_DIRS or propagated it. >>> >>> - Make sure 'xdg-mime-database' always run if glib applications are >>> there even without

Re: v2: OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Ludovic Courtès
Leo Famulari skribis: > On Fri, Sep 09, 2016 at 02:04:58PM -0400, Leo Famulari wrote: >> Also, the fix for CVE-2016-5157 does not apply to openjpeg-2.0. I'd like >> to investigate this issue separately. The only user of openjpeg-2.0 is >> mupdf. > > I think the best thing to

Re: [PATCH 1/2] gnu: openjpeg-2.*: Fix CVE-2016-7163.

2016-09-09 Thread Ludovic Courtès
Leo Famulari skribis: > On Fri, Sep 09, 2016 at 10:15:58AM +0300, Efraim Flashner wrote: >> On Fri, Sep 09, 2016 at 02:04:40AM -0400, Leo Famulari wrote: >> > diff --git a/gnu/packages/patches/openjpeg-CVE-2016-7163.patch >> >

Re: Linux kernel

2016-09-09 Thread Ludovic Courtès
David Craven skribis: > I reworked the patches for the linux-libre package and made some other > improvements that make customizing the linux-libre package easier. I > tested that everything builds and that there wasn't any breakage on > x86_64, but testing the arm kernel on

[PATCH] gnu: Add schismtracker.

2016-09-09 Thread Kei Kebreau
For those who love making tracks, X11 or not! If someone could look over this (and build it, please!), that would be nice. :-) From 91dbcb5c61de4b4b45f85b3bad8cf9e713c564b0 Mon Sep 17 00:00:00 2001 From: Kei Kebreau Date: Fri, 9 Sep 2016 18:16:12 -0400 Subject: [PATCH] gnu:

Re: [PATCH]: opensmtpd, opensmtpd-extras, libasr.

2016-09-09 Thread ng0
Hi, Eric Bavier writes: > On Thu, 08 Sep 2016 11:15:37 + > ng0 wrote: > >> From 43b89c0b548e1bca2ff59271ac15b1fbe6e7ca6e Mon Sep 17 00:00:00 2001 >> From: ng0 >> Date: Tue, 6 Sep 2016 18:23:15 + >> Subject: [PATCH

[PATCH] gnu: Resurrect hydra.

2016-09-09 Thread Jan Nieuwenhuizen
Hi! I wanted to play with Hydra and found it did not build and so did not some of its dependencies. Our nix package got updated which broke the hydra build. First I downgraded nix to 1.8. That worked, eventually. We decided on #guix that we'd rather upgrade than downgrade. So I upgraded

Re: [PATCH] gnu: Add darkhttpd.

2016-09-09 Thread Leo Famulari
On Sat, Sep 10, 2016 at 01:26:23AM +0530, Arun Isaac wrote: > * gnu/packages/web.scm (darkhttpd): New variable. Hi, thank you for this patch! > + `(#:tests? #f When we disable the tests, we have to leave a comment explaining why. It can be as simple as "No test suite" if that is the case.

[PATCH 2/3] gnu: Add libaacs.

2016-09-09 Thread Andy Patterson
* gnu/packages/video.scm (libaacs): New variable. --- gnu/packages/video.scm | 25 + 1 file changed, 25 insertions(+) diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index a6eac2b..d57393a 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@

[PATCH 1/3] gnu: Add libbdplus.

2016-09-09 Thread Andy Patterson
* gnu/packages/video.scm (libbdplus): New variable. --- gnu/packages/video.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index 864e691..a6eac2b 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@

[PATCH 3/3] gnu: libbluray: Enable libaacs and libbdplus support.

2016-09-09 Thread Andy Patterson
* gnu/packages/video.scm (libbluray) [inputs]: Add libaacs and libbdplus. [arguments]: Add 'fix-dlopen-paths' to #:phases. --- gnu/packages/video.scm | 18 +- 1 file changed, 17 insertions(+), 1 deletion(-) diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index

Re: [PATCH] gnu: Add git-review.

2016-09-09 Thread Clément Lassieur
Clément Lassieur writes: > With the patch already pushed, I get this error: > > --8<---cut here---start->8--- > Using global/system git-review config files (/etc/git-review/git-review.conf) > is deprecated > Downloading

Re: v2: OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Leo Famulari
On Fri, Sep 09, 2016 at 02:04:58PM -0400, Leo Famulari wrote: > Also, the fix for CVE-2016-5157 does not apply to openjpeg-2.0. I'd like > to investigate this issue separately. The only user of openjpeg-2.0 is > mupdf. I think the best thing to do is update mupdf to the latest upstream release,

[PATCH] gnu: Add darkhttpd.

2016-09-09 Thread Arun Isaac
* gnu/packages/web.scm (darkhttpd): New variable. --- gnu/packages/web.scm | 34 ++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index 20c7d12..261eed2 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@

Re: How to use "every"?

2016-09-09 Thread Alex Kost
Marius Bakke (2016-09-09 14:10 +0100) wrote: > Danny Milosavljevic writes: > >> Hi, >> >> how do I use "every" in a guix package declaration? >> >> When I add #:modules (sfri sfri-1) I get a message that guix-build is >> undefined (?). > > I think when setting #:modules,

Re: [PATCH] gnu: Add git-review.

2016-09-09 Thread Alex Kost
Efraim Flashner (2016-09-09 18:00 +0300) wrote: [...] > +(arguments > + `(#:tests? #f ; tests require a running Gerrit server > + #:phases > + (modify-phases %standard-phases > + (add-after 'unpack 'hardcode-outside-programs > + (lambda _ A side note: I

[WIP PATCH] gnu: add U-Boot support to operating-system configuration.

2016-09-09 Thread Danny Milosavljevic
--- gnu.scm | 1 + gnu/build/install.scm | 45 +- gnu/build/vm.scm| 3 +- gnu/system.scm | 20 +++- gnu/system/grub.scm | 5 ++ gnu/system/u-boot.scm | 124 gnu/system/vm.scm

v2: OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Leo Famulari
On Fri, Sep 09, 2016 at 02:04:39AM -0400, Leo Famulari wrote: > Two bugs disclosed in OpenJPEG, CVE-2016-5157 and CVE-2016-7163. Both > can be used to execute arbitrary code, apparently. > > CVE-2016-7163: > http://seclists.org/oss-sec/2016/q3/442 > > CVE-2016-5157: >

Re: [PATCH] gnu: emacs: Use https for elpa.gnu.org

2016-09-09 Thread Alex Kost
ng0 (2016-09-08 23:27 +) wrote: > Hi, > > can someone else comment on this thread? I've listed part of my reasons, > not all, my position should be clear. Since your other similar patches (http->https) were committed, I don't see a problem with this one, so if no one will object in a day or

on running/building hydra

2016-09-09 Thread Jan Nieuwenhuizen
Hi! Trying to build hydra, I get `/gnu/store/lbcfs5201dszjv6sy8y1frafjhjivwpc-hydra-20150407.4c0e3e4/testFile configure.ac is read-only; trying to patch anyway patching file configure.ac File tests/Makefile.am is read-only; trying to patch anyway patching file tests/Makefile.am

on running/building hydra

2016-09-09 Thread Jan Nieuwenhuizen
Hi! Trying to build hydra, I get `/gnu/store/lbcfs5201dszjv6sy8y1frafjhjivwpc-hydra-20150407.4c0e3e4/testFile configure.ac is read-only; trying to patch anyway patching file configure.ac File tests/Makefile.am is read-only; trying to patch anyway patching file tests/Makefile.am

Re: [PATCH] gnu: Add git-review.

2016-09-09 Thread Clément Lassieur
Efraim Flashner writes: > Oh no! I just pushed this. With the patch already pushed, I get this error: --8<---cut here---start->8--- Using global/system git-review config files (/etc/git-review/git-review.conf) is deprecated

Re: [PATCH] gnu: tbb: Update to 2017_20160722.

2016-09-09 Thread ng0
Eric Bavier writes: > On 2016-09-09 10:10, ng0 wrote: >> Eric Bavier writes: >> >>> The 2017 version also brings with it a change in license from GPLv2 >>> with >>> libstdc++ runtime exception to the ASL2.0. Could you include that in

Re: bug#24188: gnucash needs gtk+ in propagated-inputs

2016-09-09 Thread Arun Isaac
>> To actually fix this package (and some others) we can: >> >> - Wrap them with shared-mime-info in XDG_DATA_DIRS or propagated it. >> >> - Make sure 'xdg-mime-database' always run if glib applications are >> there even without shared-mime-info referenced by profile. >> IIRC, this was

Re: wip v2 u-boot support

2016-09-09 Thread David Craven
Hi Danny, > Anyway, attached gnu/system/u-boot.scm which it left off *again* (after git > add, even). (How is having a new file not a *diff*erence? Sigh) `git add -N .` adds untracked files to the list of tracked ones. git diff should then work as expected. I'm sorry to say that I can't apply

Re: wip v2 u-boot support

2016-09-09 Thread Danny Milosavljevic
Hi David, On Fri, 9 Sep 2016 14:02:53 +0200 David Craven wrote: > It still doesn't work. Can you please also include gnu system u-boot > in the patch? git randomly decided to leave things off the patch when I do "git diff". Sigh. > It's nice if you can simply apply (all

Re: [PATCH] gnu: tbb: Update to 2017_20160722.

2016-09-09 Thread Eric Bavier
On 2016-09-09 04:51, ng0 wrote: * gnu/packages/tbb.scm (tbb): Update to 2017_20160722. --- gnu/packages/tbb.scm | 7 --- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/gnu/packages/tbb.scm b/gnu/packages/tbb.scm index 0e9db72..22ce068 100644 --- a/gnu/packages/tbb.scm +++

Re: [PATCH] gnu: Add git-review.

2016-09-09 Thread Efraim Flashner
On Fri, Sep 09, 2016 at 10:23:20AM +0200, Clément Lassieur wrote: > Efraim Flashner writes: > > > On Thu, Sep 08, 2016 at 10:28:37PM +1000, Ben Woodcroft wrote: > > >> I think including git simply as an input is problematic because git-review > >> calls git via

[PATCH 03/12] guix: Add java-utils.

2016-09-09 Thread Hartmut Goebel
* guix/build/java-utils.scm: New file. * guix/build-system/ant.scm: Use it. * Makefile.am (MODULES): Add it. --- Makefile.am | 1 + guix/build-system/ant.scm | 2 ++ guix/build/java-utils.scm | 52 +++ 3 files changed, 55 insertions(+)

Re: [PATCH] gnu: tbb: Update to 2017_20160722.

2016-09-09 Thread ng0
Eric Bavier writes: > On 2016-09-09 04:51, ng0 wrote: >> * gnu/packages/tbb.scm (tbb): Update to 2017_20160722. >> --- >> gnu/packages/tbb.scm | 7 --- >> 1 file changed, 4 insertions(+), 3 deletions(-) >> >> diff --git a/gnu/packages/tbb.scm

[PATCH 11/12] gnu: Add java-commons-lang3.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-commons-lang3): New variable. --- gnu/packages/java.scm | 52 +++ 1 file changed, 52 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index 5a90d05..b7971a3 100644 --- a/gnu/packages/java.scm

[PATCH 08/12] gnu: Add java-commons-daemon.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-commons-daemon): New variable. --- gnu/packages/java.scm | 32 1 file changed, 32 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index a5d3a25..e200296 100644 --- a/gnu/packages/java.scm +++

[PATCH 12/12] gnu: Add java-commons-bcel.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-commons-bcel): New variable. --- gnu/packages/java.scm | 18 ++ 1 file changed, 18 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index b7971a3..b1e1ecc 100644 --- a/gnu/packages/java.scm +++ b/gnu/packages/java.scm @@

[PATCH 09/12] gnu: Add java-commons-io.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-commons-io): New variable. --- gnu/packages/java.scm | 42 ++ 1 file changed, 42 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index e200296..3af8cd0 100644 --- a/gnu/packages/java.scm +++

[PATCH 06/12] gnu: Add java-commons-cli.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (appache-commons-url): New function. (java-commons-cli): New variable. --- gnu/packages/java.scm | 48 1 file changed, 48 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index 3687c7e..a83423d

[PATCH 07/12] gnu: Add java-commons-codec.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-commons-codec): New variable. --- gnu/packages/java.scm | 32 1 file changed, 32 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index a83423d..a5d3a25 100644 --- a/gnu/packages/java.scm +++

[PATCH 01/12] guix: ant-bulild-sytem: allow specifying the source directory.

2016-09-09 Thread Hartmut Goebel
* guix/build-system/ant.scm (ant-build) Add parameter src-dir. * guix/build/ant-build-system.scm (default-build.xml): New parameter src-dir. (configure): pass src-dir on to default-build.xml. * doc/guix.texi (Build Systems): Add description. --- doc/guix.texi | 3 ++-

[PATCH 04/12] gnu: Add java-plexus-utils.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (codehaus-plexus-url): New function. (java-plexus-utils): New variable. --- gnu/packages/java.scm | 32 1 file changed, 32 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index e8d09dd..0dfd9fa 100644 ---

[PATCH 00/12] Java build-system and some packages

2016-09-09 Thread Hartmut Goebel
Enclosed please find some enhancemnets to the java/ant build-system and some java packages. For the changes to the build-systm I'd apprechiate ideas for better code. There also is room for improovements, e.g. adding both a "test" (unsing junit) and a "javadoc" target to the default build.xml. (I

[PATCH 05/12] gnu: Add java-plexus-interpolation.

2016-09-09 Thread Hartmut Goebel
* gnu/packages/java.scm (java-plexus-interplation): New variable. --- gnu/packages/java.scm | 28 1 file changed, 28 insertions(+) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index 0dfd9fa..3687c7e 100644 --- a/gnu/packages/java.scm +++

[PATCH 02/12] guix: ant-build-system: use abs path as basedir

2016-09-09 Thread Hartmut Goebel
This allows to chdir into some sub-project prior to building. * guix/build/ant-build-system.scm (default-build.xml): Add parameter. (configure): Pass current directory as base-dir to default-build.xml. --- guix/build/ant-build-system.scm | 6 +++--- 1 file changed, 3 insertions(+), 3

Re: wip v2 u-boot support

2016-09-09 Thread Danny Milosavljevic
diff --git a/gnu.scm b/gnu.scm index 932e4cd..9207e38 100644 --- a/gnu.scm +++ b/gnu.scm @@ -35,6 +35,7 @@ (gnu system mapped-devices) (gnu system file-systems) (gnu system grub) ; 'grub-configuration' +(gnu system u-boot)

Re: bug#24188: gnucash needs gtk+ in propagated-inputs

2016-09-09 Thread Ludovic Courtès
iyzs...@member.fsf.org (宋文武) skribis: > Arun Isaac writes: > >>> The following environment variables are set which may make a difference >>> here: >>> >>> GUIX_GTK3_PATH=/run/current-system/profile/lib/gtk-3.0 >>>

Re: [PATCH 16/17] gnu: Add linux-libre-multi-v7.

2016-09-09 Thread Vincent Legoll
Hello On Fri, Sep 9, 2016 at 2:34 PM, David Craven wrote: > * gnu/packages/linux.scm (linux-libre-multi-v7): New variable. Nitpick, multi-v7 is not really telling, why not adding at least "arm" in the name ? -- Vincent Legoll

Re: Four thousand!

2016-09-09 Thread Robert James Fischer
In-reply-to: <87fupblahh@gnu.org> 4K, yes !

Re: How to use "every"?

2016-09-09 Thread Marius Bakke
Danny Milosavljevic writes: > Hi, > > how do I use "every" in a guix package declaration? > > When I add #:modules (sfri sfri-1) I get a message that guix-build is > undefined (?). I think when setting #:modules, you also have to specify the "expected" ones, i.e. it will

How to use "every"?

2016-09-09 Thread Danny Milosavljevic
Hi, how do I use "every" in a guix package declaration? When I add #:modules (sfri sfri-1) I get a message that guix-build is undefined (?). ;; FIXME import "every" somehow (define-public pypy3.3 (package (name "pypy3.3") (version "5.2.0") (source (origin (method

Re: [PATCH] gnu: Add seqtk.

2016-09-09 Thread Marius Bakke
Marius Bakke writes: > The program seems to bundle {khash,kseq}.h from htslib. Could you try > replacing them with the files directly from htslib? There are quite a > few examples of doing this already in bioinformatics.scm. The released version bundles a few unnecessary

[PATCH 04/17] gnu: linux-libre: Apply %boot-logo patch in origin.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre)[origin]: Apply %boot-logo patch in origin. --- gnu/packages/linux.scm | 8 ++-- 1 file changed, 2 insertions(+), 6 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 1544811..369a232 100644 --- a/gnu/packages/linux.scm +++

[PATCH 10/17] gnu: Add u-boot-beagle-bone-black.

2016-09-09 Thread David Craven
* gnu/packages/u-boot.scm (u-boot-beagle-bone-black): New variable. --- gnu/packages/u-boot.scm | 3 +++ 1 file changed, 3 insertions(+) diff --git a/gnu/packages/u-boot.scm b/gnu/packages/u-boot.scm index 7949d8a..0423163 100644 --- a/gnu/packages/u-boot.scm +++ b/gnu/packages/u-boot.scm @@

[PATCH 13/17] gnu: make-linux-libre: Add zImage to output.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (make-linux-libre): Add zImage to output. --- gnu/packages/linux.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index f2e6887..37bdbf4 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm

[PATCH 02/17] gnu: linux-libre: Use modify-phases.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre): Use modify-phases. --- gnu/packages/linux.scm | 80 -- 1 file changed, 39 insertions(+), 41 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 260017b..e19712f 100644 ---

[PATCH 17/17] gnu: Add linux-libre-beagle-bone-black.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre-beagle-bone-black): New variable. --- gnu/packages/linux.scm | 9 + 1 file changed, 9 insertions(+) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 2eadae2..2320a08 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm

Re: [PATCH] gnu: Add seqtk.

2016-09-09 Thread Marius Bakke
Ben Woodcroft writes: > Well, despite the lightness of my touch, it seems the licensing is in now in > order. I've updated the package, here's an updated patch. Better? I don't think this was intended to be a commit message? :) The program seems to bundle

[PATCH 14/17] gnu: linux-libre: Use kmod.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (make-linux-libre): Use kmod. --- gnu/packages/linux.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 37bdbf4..62870a4 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@

[PATCH 12/17] gnu: make-linux-libre: Add extra-version parameter.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (make-linux-libre): Add extra-version option. --- gnu/packages/linux.scm | 7 ++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 6771bd2..f2e6887 100644 --- a/gnu/packages/linux.scm +++

[PATCH 15/17] gnu: make-linux-libre: Add supported-systems parameter.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (make-linux-libre): Add supported-systems parameter. --- gnu/packages/linux.scm | 7 +-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 62870a4..384b674 100644 --- a/gnu/packages/linux.scm +++

[PATCH 16/17] gnu: Add linux-libre-multi-v7.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre-multi-v7): New variable. --- gnu/packages/linux.scm | 9 + 1 file changed, 9 insertions(+) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 384b674..2eadae2 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -399,6

[PATCH 07/17] gnu: linux-libre: Use make-linux-libre.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre, linux-libre-4.4, linux-libre-4.1): Use make-linux-libre. (make-linux-libre): New variable. --- gnu/packages/linux.scm | 78 ++ 1 file changed, 34 insertions(+), 44 deletions(-) diff --git

[PATCH 11/17] gnu: Add make-linux-libre-source.

2016-09-09 Thread David Craven
* gnu/packages/linux-libre.scm (make-linux-libre-source): New variable. (linux-libre, linux-libre-4.4, linux-libre-4.1): Use make-linux-libre-source. (linux-libre-urls): Remove. --- gnu/packages/linux.scm | 60 +- 1 file changed, 30

[PATCH 08/17] gnu: make-linux-libre: Add additional-configuration parameter.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre): Use %default-additional-kernel-configuration. (%default-additional-kernel-configuration): New variable. --- gnu/packages/linux.scm | 32 ++-- 1 file changed, 18 insertions(+), 14 deletions(-) diff --git

[PATCH 05/17] gnu: linux-libre: Move kernel configuration to configure phase.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre)[arguments]: Add configure phase. --- gnu/packages/linux.scm | 11 +++ 1 file changed, 3 insertions(+), 8 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 369a232..436f3d3 100644 --- a/gnu/packages/linux.scm +++

[PATCH 09/17] gnu: dtc: Remove patch-paths phase.

2016-09-09 Thread David Craven
From: Danny Milosavljevic * gnu/packages/u-boot.scm (dtc)[arguments]: Remove patch-paths phase. [configure-flags]: Add INSTALL. Signed-off-by: David Craven --- gnu/packages/u-boot.scm | 10 +++--- 1 file changed, 3 insertions(+), 7 deletions(-)

[PATCH 06/17] gnu: linux-libre: Add support for cross-compilation.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre): Add support for cross-compilation. --- gnu/packages/linux.scm | 14 +- 1 file changed, 9 insertions(+), 5 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 436f3d3..ce714c6 100644 --- a/gnu/packages/linux.scm +++

[PATCH 03/17] gnu: linux-libre: Use system->architecture.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (linux-libre): Use system->architecture. --- gnu/packages/linux.scm | 14 +++--- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index e19712f..1544811 100644 --- a/gnu/packages/linux.scm +++

[PATCH 01/17] gnu: module-init-tools: Prevent line wrapping.

2016-09-09 Thread David Craven
* gnu/packages/linux.scm (module-init-tools): Break line. --- gnu/packages/linux.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 030e35e..260017b 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@

Re: [PATCH] gnu: Add dlib.

2016-09-09 Thread Marius Bakke
Leo Famulari writes: > Changing the subject, you could disable the tests per-architecture. Look > for uses of current-target-system and current-system for usage examples. > But this is not absolutely required, IMO. This latest patch series now disables tests on a per-arch

Re: R

2016-09-09 Thread Ben Woodcroft
On 08/09/16 23:02, Ricardo Wurmus wrote: Ben Woodcroft writes: Hi, I thought I'd respond to this old thread now that the openblas eigen error seems to be fixed. I'm interested in using openblas so that the (as yet not in master) WGCNA package works faster, among other

Re: wip v2 u-boot support

2016-09-09 Thread David Craven
It still doesn't work. Can you please also include gnu system u-boot in the patch? or make it a separate patch if you want. It's nice if you can simply apply (all required) patches and things just work. I expect patches to work before I spend time looking at the code, but maybe I'm just old

Re: Should java .jar-filenames include the version?

2016-09-09 Thread Alex Vong
Hello, I prefer including the version. Consider the following situation. Package foo has version A and B, both installing to path ~/.guix-profile/share/java/ (symlink to store). When the user installs both version A and B, there will be a conflict. Please note that I do not know java very well.

[PATCH] gnu: Add seqtk.

2016-09-09 Thread Ben Woodcroft
From: Ben J Woodcroft Well, despite the lightness of my touch, it seems the licensing is in now in order. I've updated the package, here's an updated patch. Better? Thanks, ben * gnu/packages/bioinformatics.scm (seqtk): New variable. ---

Re: [PATCH 1/1] gnu: curl: Update replacement to 7.50.2 [fixes CVE-2016-7141].

2016-09-09 Thread ng0
Leo Famulari writes: > [ Unknown signature status ] > On Thu, Sep 08, 2016 at 08:40:12AM +0300, Efraim Flashner wrote: >> On Wed, Sep 07, 2016 at 06:04:23PM -0400, Leo Famulari wrote: >> > * gnu/packages/curl.scm (curl)[replacement]: Update to 7.50.2 >> > (curl-7.50.1):

[PATCH] gnu: tbb: Update to 2017_20160722.

2016-09-09 Thread ng0
* gnu/packages/tbb.scm (tbb): Update to 2017_20160722. --- gnu/packages/tbb.scm | 7 --- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/gnu/packages/tbb.scm b/gnu/packages/tbb.scm index 0e9db72..22ce068 100644 --- a/gnu/packages/tbb.scm +++ b/gnu/packages/tbb.scm @@ -1,5 +1,6

Re: Default shared libs for cmake-build-system experiment

2016-09-09 Thread Ludovic Courtès
Hello! Eric Bavier skribis: > So it appears that many packages are not affected by the change; llvm > and clang are most helped (with a small fix to the build phases), and > pugixml, allegro-4, and bullet to a lesser absolute degree. Many > packages apparently build

Re: [PATCH] gnu: Use a directory owned by ntpd user for drift file.

2016-09-09 Thread Ludovic Courtès
Hi, Vincent Legoll skribis: >> +(define (ntp-service-activation config) >> + "Return the activation gexp for config" >> + #~(begin >> + (use-modules (guix build utils)) >> + >> + (define %user >> +(getpw "ntpd")) >> + >> + (let ((directory

Re: Guile 2.2 packages

2016-09-09 Thread Ludovic Courtès
Danny Milosavljevic skribis: > On Wed, 07 Sep 2016 22:49:12 +0200 > l...@gnu.org (Ludovic Courtès) wrote: >> I don’t know. > >>What you describe sounds a lot like a search path issue. > > It is a search path issue. > > Does package-for-guile-2.2 take it into account? > >

Re: NPM and trusted binaries

2016-09-09 Thread Pjotr Prins
On Fri, Sep 09, 2016 at 10:45:43AM +0200, Ludovic Courtès wrote: > Yes, that’s a serious concern. Maybe all we can reasonably hope to > achieve is to provide a core subset of the free NPM packages in Guix > proper, built from source. > > People may still end up using automatically-generated,

Re: [PATCH] gnu: Add threadingbuildingblocks.

2016-09-09 Thread ng0
Eric Bavier writes: > On Thu, 8 Sep 2016 23:07:06 + > ng0 wrote: > >> * gnu/packages/parallel.scm (threadingbuildingblocks): New variable. >> --- >> gnu/packages/parallel.scm | 33 + >> 1 file changed,

Re: [PATCH] gnu: Add threadingbuildingblocks.

2016-09-09 Thread ng0
Eric Bavier writes: > On Thu, 8 Sep 2016 23:07:06 + > ng0 wrote: > >> * gnu/packages/parallel.scm (threadingbuildingblocks): New variable. >> --- >> gnu/packages/parallel.scm | 33 + >> 1 file changed,

Re: [PATCH] gnu: Add threadingbuildingblocks.

2016-09-09 Thread ng0
Marius Bakke writes: > ng0 writes: > >> +(arguments >> + `(;; XXX: make 'check' is run with 'make all', however the 'all' phase >> takes >> + ;; 30+ minutes on a AMD FX-4300 Quad-Core Processor buildmachine. >> + #:tests? #f >

Re: NPM and trusted binaries

2016-09-09 Thread Ludovic Courtès
Hi Mike, Mike Gerwitz skribis: > Now how the hell is this enforced with thousands of dependencies that > have not undergone any review, within a community that really couldn't > care less? Even something as simple as the license: package.json has no > legal force; it's

Re: [PATCH] gnu: Add git-review.

2016-09-09 Thread Clément Lassieur
Efraim Flashner writes: > On Thu, Sep 08, 2016 at 10:28:37PM +1000, Ben Woodcroft wrote: >> I think including git simply as an input is problematic because git-review >> calls git via 'subprocess', as evidenced by >> >> $ ./pre-inst-env guix environment -C --ad-hoc

Re: [PATCH 2/2] gnu: openjpeg-2.*: Fix CVE-2016-5157.

2016-09-09 Thread Leo Famulari
On Fri, Sep 09, 2016 at 02:04:41AM -0400, Leo Famulari wrote: > * gnu/packages/patches/openjpeg-CVE-2016-5157.patch: New file. This patch doesn't apply. I'm checking if we need to upgrade to 2.1.1. signature.asc Description: PGP signature

Re: [PATCH 1/2] gnu: openjpeg-2.*: Fix CVE-2016-7163.

2016-09-09 Thread Leo Famulari
On Fri, Sep 09, 2016 at 10:15:58AM +0300, Efraim Flashner wrote: > On Fri, Sep 09, 2016 at 02:04:40AM -0400, Leo Famulari wrote: > > diff --git a/gnu/packages/patches/openjpeg-CVE-2016-7163.patch > > b/gnu/packages/patches/openjpeg-CVE-2016-7163.patch [...] > Was from here down put/left here

Re: [PATCH 0/2] OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Efraim Flashner
On Fri, Sep 09, 2016 at 02:04:39AM -0400, Leo Famulari wrote: > Two bugs disclosed in OpenJPEG, CVE-2016-5157 and CVE-2016-7163. Both > can be used to execute arbitrary code, apparently. Ah! my favorite kind of code! Joking aside, why not patch both CVEs at the same time? > > CVE-2016-7163: >

Re: [PATCH 1/2] gnu: openjpeg-2.*: Fix CVE-2016-7163.

2016-09-09 Thread Efraim Flashner
On Fri, Sep 09, 2016 at 02:04:40AM -0400, Leo Famulari wrote: > * gnu/packages/patches/openjpeg-CVE-2016-7163.patch: New file. > * gnu/local.mk (dist_patch_DATA): Add it. > * gnu/packages/image.scm (openjpeg, openjpeg-2.0): Use it. > --- > gnu/local.mk | 1 +

[PATCH 0/2] OpenJPEG security fixes (CVE-2016-{5157,7163})

2016-09-09 Thread Leo Famulari
Two bugs disclosed in OpenJPEG, CVE-2016-5157 and CVE-2016-7163. Both can be used to execute arbitrary code, apparently. CVE-2016-7163: http://seclists.org/oss-sec/2016/q3/442 CVE-2016-5157: http://seclists.org/oss-sec/2016/q3/441 Leo Famulari (2): gnu: openjpeg-2.*: Fix CVE-2016-7163. gnu:

[PATCH 2/2] gnu: openjpeg-2.*: Fix CVE-2016-5157.

2016-09-09 Thread Leo Famulari
* gnu/packages/patches/openjpeg-CVE-2016-5157.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (openjpeg, openjpeg-2.0): Use it. --- gnu/local.mk | 1 + gnu/packages/image.scm| 2 +

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