Re: [HCP-Users] Use of spin-echo EPI scans for distortion correction of fMRI data

2015-10-05 Thread Harms, Michael
Yes, that is correct.  (The SBRef for the BOLD scans are gradient-echo images). --  Michael Harms, Ph.D. --- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry,

Re: [HCP-Users] Use of spin-echo EPI scans for distortion correction of fMRI data

2015-10-05 Thread Chris Filo Gorgolewski
Thank you for the clarification! A quick follow up question. Do you know of any systematic comparison of: 1) standard fieldmap (two pairs of phase and magnitude images) 2) fieldmap derived from a pair of spin echo images with opposite phase encoding directions 3) fieldmap derived from a pair of

Re: [HCP-Users] Use of spin-echo EPI scans for distortion correction of fMRI data

2015-10-05 Thread Glasser, Matthew
1 and 2 performed similarly when we compared them. 3 is not a good idea, as GRE images have signal dropout that is asymmetric and will mess up the registration that underlies the reversed phase encoding direction method. Matt. From: