Re: [HCP-Users] MEG_anatomy_transform.txt

2017-02-10 Thread K Jeffrey Eriksen
Hi Giorgios, I believe you have understood my problem correctly and what you have provided here looks like it is appropriate and complete. I will try to follow your example and see how it goes. I also do not know exactly what Brainstorm needs from the transform file, and am trying to get them

Re: [HCP-Users] MEG_anatomy_transform.txt

2017-02-10 Thread Georgios Michalareas
Dear Jeff, if I have understood correctly you want to import a structural MRI scan for a given HCP subject into Brainstorm for creating the EEG source model. I guess you follow a procedure similar to http://neuroimage.usc.edu/brainstorm/Tutorials/HCP-MEG and Brainstorm cannot find the

[HCP-Users] MEG_anatomy_transform.txt

2017-02-10 Thread K Jeffrey Eriksen
Hi, I am trying to import HCP processed data into Brainstorm, a Matlab-based package for EEG/MEG source analysis, in order to build an EEG source model. I do not work with MEG. Unfortunately I am failing since I do not have the _MEG_anatomy_transform.txt file that is created during the

Re: [HCP-Users] Reading gifti into matlab

2017-02-10 Thread Keith Jamison
Have you tried "which gifti" in matlab to see if some other gifti package is overriding yours? I have a few neuroimaging toolboxes (SPM, for example) that include their own gifti wrappers that don't seem compatible with HCP gifti. -Keith On Fri, Feb 10, 2017 at 1:31 PM, Lauren N