Hi,
I was wondering if there's a way to make a CIFTI file with a different
resolution? Especially in the volume part of the subcortical regions.
Basically, I'm interested in a projection of measures calculated for
DWI images into a format that only shows the cortical surfaces and
subcortical
Yes, even if you did that and got it into the 2mm space correctly in FSL
conventions (this is not easy), the absolute warp file will have near-zero
values in one of the corners, even though the voxel that should have values
close to 0 should generally be towards the center of the volume.
Tim
On
I believe that FSL convertwarp converts between relative and absolute
conventions, though the FSL coordinates issue might prevent that from being
helpful.
Matt.
From: Timothy Coalson mailto:tsc...@mst.edu>>
Date: Thursday, January 3, 2019 at 2:30 PM
To: Matt Glasser mailto:glass...@wustl.edu>>
On Thu, Jan 3, 2019 at 10:47 AM Glasser, Matthew wrote:
> 1) FSL does not respect Workbench’s header info, so the labels get
> removed. You might need to use wb_command -volume-resample or copy over
> the header info.
>
Yes, use wb_command -volume-warpfield-resample and the enclosing voxel
1) FSL does not respect Workbench’s header info, so the labels get
removed. You might need to use wb_command -volume-resample or copy over
the header info.
2) FSL has a utility to do this I believe (std2imgcoord), but it will be
slow (we used to use this for warping surfaces before we had the
Hi and Happy Hew Year,
I have 2 questions regarding warping a volume atlas and X,Y,Z
coordinates of single points with the standard2acpc_dc.nii.gz warp.
Excuse me If my questions are too naive. Here they are:
Question 1:
Dear HCP community
We have just upgraded our magnet and have had success implementing a modified
version of the 3_22 Pipelines. I wanted to inquire if there was a stable
version with FreeSurfer 6.0 and if there has been any progress made on the NHP
pipelines?
Thanks so much
Juan Sanchez
