-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats in HCP
Dear Dr. Harms,
Thank you very much for your codes. They are very helpful for me to
understand how FSLNets works. I am able to reproduce individual netmats
that are perfectly correlated with HCP distributed netmats.
I also
...@umn.edu
Date: Monday, March 30, 2015 6:54 PM
To: Harms, Michael mha...@wustl.edu
Cc: Stephen Smith st...@fmrib.ox.ac.uk, hcp-users@humanconnectome.org hcp-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats in HCP
Dear Dr. Harms,
Thank you very much for your codes. They are very
Hi Steve,
What about the correction for temporal autocorrelation?
Matt.
From: Stephen Smith st...@fmrib.ox.ac.uk
Date: Monday, March 30, 2015 at 12:15 PM
To: Yizhou Ma maxxx...@umn.edu
Cc: hcp-users@humanconnectome.org hcp-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats
...@fmrib.ox.ac.uk
Date: Monday, March 30, 2015 at 12:15 PM
To: Yizhou Ma maxxx...@umn.edu mailto:maxxx...@umn.edu
Cc: hcp-users@humanconnectome.org mailto:hcp-users@humanconnectome.org
hcp-users@humanconnectome.org mailto:hcp-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats in HCP
Hi - one thing is that we estimate (z versions of) netmats separately for each
15min run and then average the 4 netmats to give a single netmat per subject.
Cheers.
On 30 Mar 2015, at 18:14, Yizhou Ma maxxx...@umn.edu wrote:
Hi Timothy,
Thank you for pointing that out. I typed that wrong
Hi Timothy,
Thank you for pointing that out. I typed that wrong but I used the correct
transformation in matlab. As I said my transformed z scores are actually
almost perfectly linearly correlated with HCP netmats, though the latter is
much larger. I want to understand why the latter is larger
@humanconnectome.org hcp-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats in HCP
Thank you all. I don't see a comment on correction for temporal autocorrelation in the PTN document though. Could someone please point me to a page where this is explained?
Thanks,
Cherry
On Mon, Mar 30, 2015 at 12:18
@humanconnectome.org hcp-users@humanconnectome.org
Subject: Re: [HCP-Users] netmats in HCP
Thank you all. I don't see a comment on correction for temporal
autocorrelation in the PTN document though. Could someone please point me
to a page where this is explained?
Thanks,
Cherry
On Mon
Dear HCP experts,
I am trying to reproduce the individual netmats from HCP500-PTN so that I
am sure where the numbers come from. I used individual node timeseries in
/ts2/subjID and did correlation in matlab. I then used fisher's z
transformation: .5*ln(1+r)-ln(1-r). The resulting netmat is
