Re: [HCP-Users] hcp_fix and correlation maps

2017-04-06 Thread Glasser, Matthew
u>> Cc: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] hcp_fix and correlation maps Exactly Matt, in principal what you explained below is what we need. The

Re: [HCP-Users] hcp_fix and correlation maps

2017-04-06 Thread Osama Abdullah
Wednesday, April 5, 2017 at 5:54 PM To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>, "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: RE: [HCP

Re: [HCP-Users] hcp_fix and correlation maps

2017-04-06 Thread Glasser, Matthew
-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: RE: [HCP-Users] hcp_fix and correlation maps Thanks Matt. Yes, fix.log showed the error location and after correcting it we now can get the "cleaned" series (dense and atlas). What do you recommend the b

Re: [HCP-Users] hcp_fix and correlation maps

2017-04-05 Thread Osama Abdullah
hcp-users@humanconnectome.org Subject: Re: [HCP-Users] hcp_fix and correlation maps Unfortunately not all of the errors of ICA+FIX are reported to the main stderr. You’ll need to look in the log files inside the directory created by ICA+FIX to see what the error was (in matlab or R). There isn’t usuall

Re: [HCP-Users] hcp_fix and correlation maps

2017-04-05 Thread Glasser, Matthew
Unfortunately not all of the errors of ICA+FIX are reported to the main stderr. You’ll need to look in the log files inside the directory created by ICA+FIX to see what the error was (in matlab or R). There isn’t usually any need to add additional files to the spec file (this simply causes