Re: [HCP-Users] Clarification in change in fMRI reconstruction algorithm

2016-05-11 Thread Harms, Michael
Hi Ben, The following replies to your questions are from Steen Moeller (cc’ed) at CMRR. 1/ the reconstruction for all HCP data is performed using the slice-grappa algorithm. There was a change in Q3 that improved on the implementation of it relative to some low-level sequence

Re: [HCP-Users] Question about myelin maps in HCP S900 data

2016-05-11 Thread Glasser, Matthew
Always use MSMAll data for group analysis. I recommend BC for neuroanatomy, and without BC for quantitative analysis. You can always smooth a myelin map, but I recommend no smoothing. Peace, Matt. From: >

[HCP-Users] Question about myelin maps in HCP S900 data

2016-05-11 Thread Aaron C
Dear HCP experts, I have some questions about the myelin maps in HCP S900 distribution. In the folder 100307\MNINonLinear\fsaverage_LR32k, I see there are seven *.dscalar.nii files of myelin maps: 100307.MyelinMap.32k_fs_LR.dscalar.nii 100307.MyelinMap_BC.32k_fs_LR.dscalar.nii

Re: [HCP-Users] A question about saving custom parcellation label map in a CIFTI *.dlabel.nii file

2016-05-11 Thread Aaron C
This works great! Thank you! From: glass...@wustl.edu To: aaroncr...@outlook.com; hcp-users@humanconnectome.org Subject: Re: [HCP-Users] A question about saving custom parcellation label map in a CIFTI *.dlabel.nii file Date: Sun, 8 May 2016 19:13:07 + Save the matrix data as dscalar