Re: [HCP-Users] mcflirt_acc in ABCD

2017-11-08 Thread Gaurav Patel
Yes that fits with what Juan and I have seen so far—no problems with our 2mm data, but sudden weirdness with 2.4mm data. We’ll try version 3.22 and let you know if we have further issues. Thanks __ gaurav patel gauravpa...@gmail.com www.neurofreak.net > On

Re: [HCP-Users] mcflirt_acc in ABCD

2017-11-08 Thread Harms, Michael
Hi, No. I believe the switch to using FSL’s ‘mcflirt’ as the “default” motion correction was around release 3.15. I’d suggest you switch to using the latest release in the 3.x line, which is 3.22. For additional context, since the original post referenced the ABCD study, I assume that the

Re: [HCP-Users] mcflirt_acc in ABCD

2017-11-08 Thread Glasser, Matthew
Tim Brown would have to comment on this as he sets the version numbers, not me. We made this change some time ago however. Matt. From: Marta Moreno > Date: Wednesday, November 8, 2017 at 5:22 PM To: Matt Glasser

Re: [HCP-Users] mcflirt_acc in ABCD

2017-11-08 Thread Marta Moreno
Is the version 3.4.0 the latest version of the pipelines which default to FSL mcflirt? Thanks, -L Sent from my iPhone > On Nov 8, 2017, at 4:55 PM, Glasser, Matthew wrote: > > I would use the latest version of the pipelines which default to FSL mcflirt > because some

Re: [HCP-Users] mcflirt_acc in ABCD

2017-11-08 Thread Glasser, Matthew
I would use the latest version of the pipelines which default to FSL mcflirt because some folks had been seeing this issue. Peace, Matt. From: > on behalf of "Sanchez, Juan (NYSPI)"