Re: [HCP-Users] Converting greyordinates to

If you mean the fact that the HCP MMP v1.0 doesn't include any subcortical indices, you can use "wb_command -cifti-create-dense-from-template" to expand it to the standard 91282 grayordinates. However, the -cifti-parcellate command will allow you to use it on standard 91282 grayordinate data

Re: [HCP-Users] Converting greyordinates to

Can you give some specific examples including file names? Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Cathy Chen mailto:c...@alumni.princeton.edu>> Date: Monday, October 1, 2018 at 3:15 PM To: "hcp-users@humanconnectome.org"

Re: [HCP-Users] A question about white matter atlas for HCP diffusion data

I think you can use the default TBSS pipeline but you can confirm on the FSL list. Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Aaron C mailto:aaroncr...@outlook.com>> Date: Tuesday, October 2, 2018 at 8:26 AM To:

[HCP-Users] Converting greyordinates to

Hello, I hope you're doing well. Is there a way to convert greyordinates (such as the system used in subject-specific parcellations in the July 2017 release) to the system used in other nifti files in the HCP datasets (such as the processed tfMRI data in the 1200 subjects release)? I would like

Re: [HCP-Users] Resample *.dtseries.nii to native surface space

Thanks for your responses! I didn't quite realize the upsampling involved here, and that is certainly not what I'm hoping to do with these data. My goal is to analyze the resting-state data in reference to some (cortical) anatomical landmarks I have defined on a few subjects' original freesurfer

[HCP-Users] A question about white matter atlas for HCP diffusion data

Dear HCP experts, I have a question about white matter atlas for TBSS analysis of the HCP diffusion data. Would you please suggest which atlas would be appropriate for this purpose? Do I still need to do any additional registration between the white matter atlas and the TBSS results? Thank