Re: [HCP-Users] CIFTI tools in the Python

2017-10-12 Thread Ely, Benjamin
I worked on several higher-level tools as well at the recent NeuroHackWeek (based partly on Dr. Cottaar’s tools). I’m working with the NiBabel and NiWidgets groups to get some of these incorporated into future releases, but for now the provisional scripts are available at

Re: [HCP-Users] CIFTI tools in the Python

2017-10-12 Thread Ely, Benjamin
I worked on several higher-level tools as well at the recent NeuroHackWeek (based partly on Dr. Cottaar’s tools). I’m working with the NiBabel and NiWidgets groups to get some of these incorporated into future releases, but for now the provisional scripts are available at

Re: [HCP-Users] CIFTI tools in the Python

2017-10-12 Thread Christopher Markiewicz
ko <y...@onerussian.com> Sent: Thursday, October 12, 2017 8:17:16 AM To: hcp-users@humanconnectome.org; Aaron Crank; hcp-users@humanconnectome.org Subject: Re: [HCP-Users] CIFTI tools in the Python http://nipy.org/nibabel/reference/nibabel.cifti2.html ? On October 12, 2017 12:18:32 AM EDT, Aaron Cr

Re: [HCP-Users] CIFTI tools in the Python

2017-10-12 Thread Yaroslav Halchenko
http://nipy.org/nibabel/reference/nibabel.cifti2.html ? On October 12, 2017 12:18:32 AM EDT, Aaron Crank wrote: >Dear HCP experts, > > >I have a question about loading CIFTI files in the Python. Would you >please suggest if there are any well-established tools in the

Re: [HCP-Users] CIFTI tools in the Python

2017-10-12 Thread Michiel Cottaar
I've written a higher-level library for the reading and writing of CIFTI files in python based on the lower-level I/O from nibabel. You can find it at https://github.com/MichielCottaar/cifti . However, if you are looking for a well-established tool you might want to stick with nibabel. Best

Re: [HCP-Users] CIFTI tools in the Python

2017-10-11 Thread Timothy Coalson
Nibabel should support cifti files now, though it may be fairly basic: https://github.com/nipy/nibabel I don't know of other projects for cifti in python. Tim On Wed, Oct 11, 2017 at 11:18 PM, Aaron Crank wrote: > Dear HCP experts, > > > I have a question about

[HCP-Users] CIFTI tools in the Python

2017-10-11 Thread Aaron Crank
Dear HCP experts, I have a question about loading CIFTI files in the Python. Would you please suggest if there are any well-established tools in the Python to work with CIFTI format files? Thank you. ___ HCP-Users mailing list