Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-15 Thread Glasser, Matthew
manconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis Dear Experts, I had a brief follow-up question on what was mentioned in this thread about running a group IC

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-15 Thread Leonardo Tozzi
nesday, January 9, 2019 at 9:02 AM To: "Glasser, Matthew" , "Harms, Michael" , "hcp-users@humanconnectome.org" Subject: Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis It worked! Thank you very much, Leonardo Tozzi, MD, PhD Williams PanLab | Pos

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-09 Thread Leonardo Tozzi
o Tozzi , "Harms, Michael" , "hcp-users@humanconnectome.org" Subject: Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis Point it to the folder where those functions are. Matt. From: Leonardo Tozzi mailto:lto...@stanford.edu>> Date: Tuesday, Janu

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-08 Thread Glasser, Matthew
anconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis Dear Michael, The hcp_fix in the master works with fix1.067 up to the last step. It does compute and I think cl

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-08 Thread Leonardo Tozzi
63110 Email: mha...@wustl.edu From: on behalf of "Glasser, Matthew" Date: Tuesday, January 8, 2019 at 3:20 PM To: Leonardo Tozzi , "hcp-users@humanconnectome.org" Subject: Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis I

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-08 Thread Leonardo Tozzi
| Postdoctoral Fellow Stanford University | 401 Quarry Rd lto...@stanford.edu<mailto:lto...@stanford.edu> | (650) 5615738 From: "Harms, Michael" Date: Tuesday, January 8, 2019 at 1:40 PM To: "Glasser, Matthew" , Leonardo Tozzi Subject: Re: [HCP-Users] Identifying noise components

Re: [HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-08 Thread Glasser, Matthew
rd.edu>> Date: Tuesday, January 8, 2019 at 11:35 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] Identifying noise components in group MELODIC on ciftis Dear experts, I

[HCP-Users] Identifying noise components in group MELODIC on ciftis

2019-01-08 Thread Leonardo Tozzi
Dear experts, I have preprocessed with the minimal preprocessing pipeline some data which includes resting state and 3 fMRI tasks. I have then ran MELODIC group ICA on the resulting dtseries.nii files (for each task separately). My question is this: I have only greyordinate data in the outputs,