Re: [HCP-Users] average dconn from individual dconns

2018-11-28 Thread Timothy Coalson
meseries get very large when you have a lot of subjects and > timepoints. > > Matt. > > From: on behalf of Timothy > Coalson > Date: Wednesday, November 28, 2018 at 2:54 PM > To: "Kenley, Jeanette" > Cc: hcp-users , "Kaplan, Sydney" < >

Re: [HCP-Users] average dconn from individual dconns

2018-11-28 Thread Kenley, Jeanette
: Glasser, Matthew Sent: Wednesday, November 28, 2018 6:47 PM To: NEUROSCIENCE tim; Kenley, Jeanette Cc: hcp-users; Kaplan, Sydney Subject: Re: [HCP-Users] average dconn from individual dconns To be more specific: In the HCP we use a technique called MIGP to make group fMRI data and generate dense

Re: [HCP-Users] average dconn from individual dconns

2018-11-28 Thread Glasser, Matthew
behalf of Timothy Coalson mailto:tsc...@mst.edu>> Date: Wednesday, November 28, 2018 at 2:54 PM To: "Kenley, Jeanette" mailto:jkken...@wustl.edu>> Cc: hcp-users mailto:hcp-users@humanconnectome.org>>, "Kaplan, Sydney" mailto:sydney.kap...@wustl.edu>> Subj

Re: [HCP-Users] average dconn from individual dconns

2018-11-28 Thread Timothy Coalson
The HCP pipelines deliberately resample the subcortical data in such a way that the subcortical voxels used in each subject are the same, this is how we handle the problem you are having. If you concatenate your timeseries across subjects before correlation, you don't need to generate a dconn for

[HCP-Users] average dconn from individual dconns

2018-11-28 Thread Kenley, Jeanette
I am still new to the wb_command suite and trying to understand how to best use them. I have created an individual cifti (dconn.nii) for each of my subjects in 32kfslr and would like to make an average. I would like to use wb_command -cifti-average output.dconn.nii -cifti subject1.dconn.nii