can use the surfaces in
${StudyFolder}/${Subject}/T1w/fsaverage_LR32k with MSMAll if you don’t use
--xfm and --invxfm or those in
${StudyFolder}/${Subject}/MNINonLinear/fsaverage_LR32k if you do.
Peace,
Matt.
From: Xinyang Liu <xinyang_ie...@163.com>
Date: Wednesday, April 4, 201
44:25, "Glasser, Matthew" <glass...@wustl.edu> wrote:
>>>
>>> 1. Files in ${StudyFolder}/${Subject}/*T1w *are in subject’s physical
>>> space and files in ${StudyFolder}/${Subject}/*MNINonLinear* are in
>>> MNI standard space. Surfaces without MSM
MSMAll if you don’t use
--xfm and --invxfm or those in
${StudyFolder}/${Subject}/MNINonLinear/fsaverage_LR32k if you do.
Peace,
Matt.
From: Xinyang Liu <xinyang_ie...@163.com>
Date: Wednesday, April 4, 2018 at 2:36 AM
To: Matt Glasser <glass...@wustl.edu>
Cc: HCP 讨论组 <hcp-users@
ical areas across subjects.
>>
>> 2. There is no native diffusion space, as this is unnecessary. Tracking
>> occurs subject’s physical space and you can use the surfaces in
>> ${StudyFolder}/${Subject}/*T1w*/fsaverage_LR32k with MSMAll if you don’t
>> use --xfm and --i
display the surface counts in GIFTI format with --fopd,
you might ask more on the FSL list as I haven’t done much tractorgraphy in a
while.
Peace,
Matt.
From: <hcp-users-boun...@humanconnectome.org> on behalf of Xinyang Liu
<xinyang_ie...@163.com>
Date: Tuesday, April 3, 2018 at 1:52 AM
you do.
Peace,
Matt.
From: Xinyang Liu <xinyang_ie...@163.com>
Date: Wednesday, April 4, 2018 at 2:36 AM
To: Matt Glasser <glass...@wustl.edu>
Cc: HCP 讨论组 <hcp-users@humanconnectome.org>
Subject: Re: [HCP-Users] questions about using HCP surface ROIs in prob-tracking
Dear Mat
p-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] questions about using HCP surface ROIs in prob-tracking
Dear Matthew,
Thank you very much for your kind reply!
Could I continue asking two more new questions?
1. In the preprocessed struct
From: <hcp-users-boun...@humanconnectome.org> on behalf of Xinyang Liu
<xinyang_ie...@163.com>
Date: Tuesday, April 3, 2018 at 1:52 AM
To: HCP 讨论组 <hcp-users@humanconnectome.org>
Subject: [HCP-Users] questions about using HCP surface ROIs in prob-tracking
Dear HCP experts,
M
> To: HCP 讨论组 <hcp-users@humanconnectome.org>
> Subject: [HCP-Users] questions about using HCP surface ROIs in
> prob-tracking
>
> Dear HCP experts,
>
> Hi. As a new learner of the HCP tfMRI surface data, I have some questions
> when using them as ROIs to do probab
...@163.com>>
Date: Tuesday, April 3, 2018 at 1:52 AM
To: HCP 讨论组
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] questions about using HCP surface ROIs in prob-tracking
Dear HCP experts,
Hi. As a new learner of the HCP tfMRI surface dat
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