Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-04-08 Thread Glasser, Matthew
: Shachar Gal mailto:gal.shac...@gmail.com>> Date: Sunday, March 31, 2019 at 4:09 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: Timothy Coalson mailto:tsc...@mst.edu>> Subject: Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while s

Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Glasser, Matthew
so we don’t expect any difference. Matt. From: Shachar Gal mailto:gal.shac...@gmail.com>> Date: Sunday, March 31, 2019 at 10:10 AM To: Matt Glasser mailto:glass...@wustl.edu>> Subject: Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long whi

Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Glasser, Matthew
ference. Matt. From: Shachar Gal mailto:gal.shac...@gmail.com>> Date: Sunday, March 31, 2019 at 10:10 AM To: Matt Glasser mailto:glass...@wustl.edu>> Subject: Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while hey matt, this

Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Glasser, Matthew
, 2019 at 10:32 AM To: Matt Glasser mailto:glass...@wustl.edu>> Subject: Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while Its 500 time points. I'll have a look at the volume input tommorow when I get back to the office. I ran them serial

Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Glasser, Matthew
Date: Sunday, March 31, 2019 at 8:27 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while some furthe

Re: [HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Shachar Gal
some further information that might be useful - the output file rfMRI_REST_AP_temp_atlas.dtseries.nii, has already been created. its in the target folder. but the command won't stop "running" On Sun, 31 Mar 2019 at 16:13, Shachar Gal wrote: > Dear experts, > > while running the fMRISurface

[HCP-Users] wb_command -cifti-resample in sub-cortical processing taking suspiciously long while

2019-03-31 Thread Shachar Gal
Dear experts, while running the fMRISurface pipeline (using the latest pipeline release) I encountered an issue where the subcortical-processing script takes a really long while (now running for more than 6 hours). this is the command on which it is stuck ${CARET7DIR}/wb_command