The version of perl installed on my Macbook Pro has C::L installed. JeffOn Sep 1, 2006, at 3:09 PM, Bruce Ravel wrote:perl -e 'use Compress::Zlib' ___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
If anyone would like to test the OS X Mactel version, please drop me
an email and I will send you a link to it.
The current version does not have an install which should be
available as soon as I know that everything works. There are only a
couple of files that need to be put in sensitive
,
--Matt
On 11/24/06, Jeff Terry [EMAIL PROTECTED] wrote:
If anyone would like to test the OS X Mactel version, please drop me
an email and I will send you a link to it.
The current version does not have an install which should be
available as soon as I know that everything works. There are only
An installer for the OS X Mactel version has been placed on the MRCAT
website.
http://mrcat.iit.edu/iXAFSinstall.tar.gz
There is a link on the main page of the website under useful software.
Jeff
___
Ifeffit mailing list
,
This is the case -- as I made the mac installer. The x86 mac cpu
version was made by Jeff Terry. I am getting a new macpro notebook
this week so I will start working on the installer sometime soon
hopefully. I am still a little scared by Jeff's saying it wasn't
trivial. Were there a lot of changes
, Jeff Terry wrote:
Hi all,
I believe that there is a link to a Mac Intel version of these at
the
MRCAT home page:
http://mrcat.iit.edu/
There should be an installer for the Intel Macs there. It does
require X11 to be installed already.
Jeff
On Feb 22, 2007, at 8:51 AM, Paul Fons wrote
The XAS foil standards the we use are from :
EXAFS Materials
871 El Cerro Blvd
Danville CA 94526
Their old phone number was 510-838-7162.
Unfortunately, the phone number was scratched off on our most recent
box, although the new area code is 925. It is possible the area code
only that has
Original Message
Subject: Re: [Ifeffit] Mac intel OSX - Feff6 whereabouts
From:Jeff Terry [EMAIL PROTECTED]
Date:Tue, July 17, 2007 6:53 am
To: XAFS Analysis using Ifeffit
ifeffit@millenia.cars.aps.anl.gov
Hi Ross,
Try the installer package at:
http://mrcat.iit.edu/iXAFSinstall.tar.gz
Jeff
On Jul 16, 2007, at 9:39 PM, Ravel, Bruce D. wrote:
Ross,
The Ifeffit mailing list is a superb resource for all your ifeffit
+friends questions.
http://cars9.uchicago.edu/mailman/listinfo/ifeffit/
Hi Matt,
That would be strange, if you had to move the libraries. I hadn't
heard of this problem before.
It should look in /Applications/iXAFS.app/executables or /
Applications/iXAFS.app/libraries
for the associated files. I don't have an /Applications/Ifeffit/lib
library at all on my
Hi Matt,
The idea is to have everything self-contained in as few places as
possible.
iXAFS.app contains almost everything necessary to run all of the
unixy apps.
The idea is to run from /Applications/iXAFS.app and not from /
Applications/ifeffit.
My take on it that having an
Hi All,
We have been building IFEFFIT 1.2.9 using Matt's configure script.
Maybe misc_rand.f is depr
Here's what I did to build things. I have no idea if the resulting
binaries/libraries work correctly, although there were no obvious
problems when running the tests included in the
Sorry all,
I am going to try to sit down next week and update the installer.
Jeff
On Oct 12, 2007, at 12:35 PM, Matt Newville wrote:
HI Xue,
This is probably due to a missing or corrupt grfont.dat file. This
file *should* be somewhere under /Applications/Ifeffit , and
probably in
Hi Hind,
We have a working Universal Binary of iXAFS that we hope to release
today or tomorrow.
We are in the final testing stages as we don't want to screw up
anyones working system.
I believe that this should solve your problem. We will post a message
when we upload
this final version.
Hi All,
iXAFS version 2 for Mac OS X 10.4 and above has been released as a
beta version. We have tested this version on ppc and intel macs
running OS X 10.4 and 10.5.
You must have Apple's version of X11 installed in order to use iXAFS.
Ken McIvor put in yeoman's work to build the full
Hind,
X11 would be in /Applications/Utilities/
You should install X11 off of your 10.4 DVD and then apply the update.
Jeff
On Dec 7, 2007, at 5:42 AM, Hind Al-Abadleh wrote:
Hi Jeff,
This is great news. I downloaded the beta version, and got the error
message Apple's X11 for Mac OSX is
me X11 couldn't be located. So looks like my X11 is
somehow corrupted. I'll reinstall the developer tools and hopefully
that will solve the problem.
Cheers,
Andrew
--
Message: 4
Date: Tue, 11 Dec 2007 10:06:53 -0600
From: Jeff Terry [EMAIL PROTECTED]
Subject: Re
Hi Jenny,
I just wanted to add a bit to Matt's answer on TEY vs FY and suggest a
couple of reference for you.
There are three contributions to the TEY: photoelectrons, Auger
Electrons, and secondary electrons. The secondary electrons will
typically determine the maximum depth that you
Hi All,
We will take a look at this when we get a 10.6 machine.
Jeff
On Sep 8, 2009, at 4:11 PM, Joel Kelly wrote:
Hello,
I recently upgraded to OS 10.6 (snow leopard) on my intel Mac. It
comes with version 2.3.4 of X11.
Now, I can't seem to run any of the Horae GUI applications! I've
Beamline 3-3 at SSRL was very good in this range. I made Mg K-edge
XAFS measurements there many times. I do not know if this is one of
the beamlines that was shuttered during the SSRL upgrade though.
There is also a chance that the Double Crystal Monochromator beamline
at the SRC could make
Hi Delphine,
You can download a file here:
http://mrcat.iit.edu/ixafs/iXAFS%202.1.1%20b1.dmg
You should be able to drag the iXAFS file to your applications folder.
It should just launch from there.
Jeff
On Mar 30, 2010, at 10:27 AM, Bruce Ravel wrote:
Hi all,
Could one of you Mac
Sorry, I have no idea what the problem is but if you are us OS X 10.5
or 10.6, you can try the iXAFS package at this link:
iXAFS 2.1 β1 (http://mrcat.iit.edu/ixafs/iXAFS%202.1.1%20b1.dmg).
Jeff
On Jun 22, 2010, at 6:32 PM, JESUS ISAAC AGUIRRE QUIROZ wrote:
Hi everyone, i'm using a macbook
Funny, it looks a lot like 80 ng of TcDTPA.
http://mrmac.mr.aps.anl.gov/~jterry/images/TcDTPAxmu.jpg
I think that high background is due to politicians.
Jeff
Jeff Terry
Asst. Professor of Physics
Life Science Bldg Rm 166
Illinois Institute of Technology
3101 S. Dearborn St.
Chicago IL 60616
iXAFS originally started out as a wrapper to launch the individual programs. At
that time, it was a simple matter to replace any of the individual programs.
Ken McIvor has improved iXAFS so that it now builds universal projects but has
perl code embedded. This makes it more difficult to update.
I believe that Bruce is correct in that an updater incorporated into a build
script
would be the proper way to update the iXAFS code.
The cocoa code for iXAFS is very simple and rarely needs updating.
Jeff
On Aug 31, 2010, at 9:07 AM, Bruce Ravel wrote:
On Tuesday 31 August 2010 02:19:50
Hi All,
If you have been using the iXAFS Shell for command line access, note that
it is currently not working in this version.
Jeff
On Sep 3, 2010, at 10:08 PM, Matt Newville wrote:
Hi Folks,
With help from Ken McIvor and Jeff Terry, I've built a new version of
iXAFS for Mac OS X
Hi George,
You need to have a fortran compiler installed on your Mac. You can find
information on Mac OS X fortran compilers here:
http://hpc.sourceforge.net/
Once you have the compilers installed, you compile the feff702.f file. You can
run it from the command line using any feff.inp file.
Following Matt's example, you would go to the directory where you build the
program. You need to have a valid feff.inp file inside that directory.
At the prompt (%), could be different depending on what shell you are running,
type:
./feff702
It should run.
Jeff
On Oct 27, 2010, at 1:19 PM,
That should work fine. Alternately, you the new version should overwrite the
old if you drag it to the Applications folder.
Sent from my iPhone
On Nov 29, 2010, at 9:05 AM, George Sterbinsky
georgesterbin...@u.northwestern.edu wrote:
Hi, I am wondering what is the best way to uninstall
have version
2. Is this just a case of confusing labeling, or has some aspect of my
installation gone awry?
Thank you,
George
On Mon, Nov 29, 2010 at 10:37 AM, Jeff Terry ter...@iit.edu wrote:
That should work fine. Alternately, you the new version should overwrite the
old if you drag
Hi Scott,
It seems to work for norm(E) fitting with Athena 0.8.061 under OS X 10.6.
Jeff
On Jan 7, 2011, at 8:07 PM, Scott Calvin wrote:
Hi all,
Athena has been crashing for me during one particular linear combination
analysis, and I'm wondering if any of you have an explanation. A
with
norm(E) and deriv(E) fitting for me as well. It does NOT work with chi(k)
fitting for me.
--Scott Calvin
Faculty at Sarah Lawrence College
Currently on sabbatical at Stanford Synchrotron Radiation Laboratory
On Jan 7, 2011, at 7:58 PM, Jeff Terry wrote:
Did not try really hard to work
. A low energy Ge
detector with a thin C window should be able to detect Al as well.
Jeff
Jeff Terry
Assoc. Professor of Physics
Life Science Bldg Rm 166
Illinois Institute of Technology
3101 S. Dearborn St.
Chicago IL 60616
630-252-9708
ter...@iit.edu
On Oct 11, 2011, at 9:47 AM, Kompch
Hello,
If you have done a DFT calculation, you can take the atom coordinates from the
calculation and just put them directly into a Feff input file. No need to use
atoms.
If you are not sure how to build a feff input file, you can run a dummy atoms
file with Zn to get a rough template and
Hi Matt,
Can you send them back to me? I have a new machine with a clean installation
that I would like to try on.
Thanks,
Jeff.
Sent from my iPad
On Nov 12, 2012, at 8:57 AM, Matt Newville newvi...@cars.uchicago.edu wrote:
Hi Yohei, All,
Thanks for the tip! Is anyone able to work
To add to what Matt has suggested, If your protein is stable under vacuum,
beamline 8-1 at SSRL would be able to do the NEXAFS measurement. You don't need
to worry about carbon as it can't reach the carbon edge.
I left a vacuum flange mounted, low energy fluorescence detector at SSRL many
I'll second Igor Pro.
Jeff
Sent from my iPhone
On Mar 26, 2013, at 3:57 PM, Bare, Simon R simon.b...@honeywell.com wrote:
Igor
Simon
-Original Message-
From: ifeffit-boun...@millenia.cars.aps.anl.gov
[mailto:ifeffit-boun...@millenia.cars.aps.anl.gov] On Behalf Of Eva
Matt is correct. The graphics in Larch are much better than the graphics in the
old version of ifeffit.
I may go back to using the command line.
Jeff
On Mar 26, 2013, at 6:12 PM, Matt Newville newvi...@cars.uchicago.edu wrote:
The poor quality of the graphics in the older versions of
Hi George,
This is a GUESS as I have not installed athena from macports.
I can't be sure as I don't know if that version of Athena uses X11 but I
imagine that it does.
Try typing echo $DISPLAY in a terminal window and see if you get a result. If
you don't then you may not have
Glad to hear it.
Jeff
Sent from my iPhone
On Jan 26, 2014, at 7:49 PM, George Sterbinsky
georgesterbin...@u.northwestern.edu wrote:
Hi Jeff,
That fixed the problem. Thanks for your help.
Best,
George
On Sat, Jan 25, 2014 at 3:35 PM, Jeff Terry ter...@iit.edu wrote:
Hi George
Hi All,
I never remember what the rules are here for posting postdoc positions but I
have one position available.
You can see more information about the position here:
http://mrmac.mr.aps.anl.gov/~jterry/postdoc.html
Please let anyone who might be interested know.
Thanks,
Jeff
Jeff
Hi All,
Has anyone successfully installed jfeff 9.6.4 on OS X Sierra?
The installer crashes after requesting a password when I try to run it.
I have tried on OS X El Capitan 10.11 and the same version of java but I get an
error message saying it doesn’t recognize java.
If I downgrade to
I haven’t been able to get through to the website for months. I assumed that
they went under.
Jeff
Sent from my iPhone
> On Jan 29, 2020, at 6:58 PM, Bare, Simon R wrote:
>
> Talking of websites does anyone know what happened to the International XAFS
> website? I can’t access it. And
e actually up and the Executive Committee has had a chance
> to way in on this. I'll keep you all posted, but it is completely fair to
> be poking me about this on a regular basis.
>
> --Matt
>
>
>
> On Wed, Jan 29, 2020 at 7:48 PM Jeff terry <mailto:ter...@iit.edu>> wr
eld by value,
which is unsupported.
I think that line 11 is: load_entry_point('xraylarch==0.9.46',
'console_scripts', 'larch')()
Any ideas on how to address this issue?
Thanks,
Jeff
Jeff Terry
Professor of Physics, Illinois Institute of Technology
ter...@iit.edu
__
t least until pyepics gets fixed.
>
>
> On Thu, Jan 9, 2020 at 2:37 AM Jeff Terry <mailto:ter...@iit.edu>> wrote:
> Hi Matt,
>
> I had to upgrade my Mac to OS X 10.15 and it blew up my Anaconda distribution
> which has forced me to reinstall everythin
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