[Jmol-users] Clearing measurments (was Picking and measuring)

G'day, By the way, I tried some of the double-click method, but I did not fins how to remove the measurements from the viewer window; unchecking the "show measurements" option in the pop-up menu did not work. How can it be done? You've preempted my next question. This is a query I've also had fro

Re: [Jmol-users] Re: Picking and measuring

G'day, It is quite helpful to have a well-defined specification of exactly what needs to be done ... even if it might seem obvious. No problem - I've posted the RFE Thanks, Chris.

Re: [Jmol-users] Re: Picking and measuring

On Tue, March 22, 2005 10:37 am, timothy driscoll said: > > Eric suggested that the atom click also return, in some fashion, distance > and angle data. for example, the distance would be the distance from the > clicked atom to the previously clicked atom; the angle would include the > previous two

Re: [Jmol-users] Set hydrogen on/off using script editor

timothy driscoll wrote: On 2005-03-22 (10:25) Manish Agrawal wrote: I am trying this command to turn off display of hydrogen atoms: "set hydrogens off". It's not doing anything. Do I need to change any other display settings? I don't think that syntax is correct. try "restrict not hydrogen" instea

[Jmol-users] Re: Select hydrogens bonded to nitrogens

Hi, a month ago someone asked about selecting hydrogens bonded to nitrogens. The only solution found at this time was to work with distance. A new command substructure() has been added to the development version of Jmol that should work for this : select hydrogen and substructure("[NH]") To try

Re: [Jmol-users] Re: Picking and measuring

On 2005-03-22 (08:46) Miguel wrote: > >>G'day, >> >>There haven't been any further comments about this, so here is a >>draft RFE covering the suggestions so far: > >=5Bsnip=5D > >Chris, > >Thank you very much for writing this up. > >It is quite helpful to have a well-defined specification of exact

Re: Re: [Jmol-users] two consoles

> >>De: [EMAIL PROTECTED] >>I thought it was possible to access both consoles from the top menu. I >> don't have access right now to a Jmol app so I can't check it. > > I was able to check : the second console is accessible with File / Script My plan was for the script console to become the 'cons

Re: [Jmol-users] Re: Picking and measuring

> G'day, > > There haven't been any further comments about this, so here is a draft RFE > covering the suggestions so far: [snip] Chris, Thank you very much for writing this up. It is quite helpful to have a well-defined specification of exactly what needs to be done ... even if it might seem

Re: [Jmol-users] Set hydrogen on/off using script editor

Manish, First use the select command as detailed at the page Tim referred you to: http://www.stolaf.edu/people/hansonr/jmol/docs/ Then follow it with a rendering command such as spacefill, also detailed at the URL above. It might be a good idea to take a look at the examples at the jmol demonst

Re: Re: [Jmol-users] two consoles

>De: [EMAIL PROTECTED] >I thought it was possible to access both consoles from the top menu. I don't >have access right now to a Jmol app so I can't check it. I was able to check : the second console is accessible with File / Script --- SF e

[Jmol-users] two consoles

Hi I have just found out that there are two different Jmol consoles in the app. One opens under the top menu, 'Help' > 'Jmol console', the other opens from the pop-up menu 'Console' > 'Open/Close' (and it's the one where ore can type commands). Can someone clarify what is the purpose of each? T