Re: [Jmol-users] Help with creating a file

2006-02-20 Thread Timothy Driscoll
On Feb 19, 2006, at 7:46 p, Jeff Hansen wrote: We are working on a project in which we would like to use Jmol to visualize hemoglobin and animate how the structure changes when oxygen binds. Does anyone have any suggestions of how we could generate the necessary pdb or xyz file? I'm guess

Re: [Jmol-users] Help with creating a file

2006-02-20 Thread Bob Hanson
Jeff, is your intent to produce a cartoon that (a) pretends to describe the actual change or (b) something that is based on some actual intermediary data of some sort in addition to the known two structures? I can see how the boundaries might get blurred here in the presentation. I'll be inte

[Jmol-users] Help with creating a file

2006-02-20 Thread Jeff Hansen
We are working on a project in which we would like to use Jmol to visualize hemoglobin and animate how the structure changes when oxygen binds. Does anyone have any suggestions of how we could generate the necessary pdb or xyz file? I'm guessing it would require some kind of molecular dyn