Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Robert Hanson
ah, right. OK. Must have forgotten that in the Jar file. Hmm On Mon, Oct 6, 2008 at 11:30 AM, Rolf Huehne <[EMAIL PROTECTED]> wrote: > Robert Hanson wrote: > > is that Mac or Linux that the problem still exists? If Mac and Linux > users > > could try at http://chemapps.stolaf.edu/jmol/docs/ex

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Rolf Huehne
Philip Bays wrote: > Link does not work for me. Do not get the page. > the correct link is: http://chemapps.stolaf.edu/jmol/docs/examples-11/simple.htm Regards, Rolf - This SF.Net email is sponsored by the Moblin Your Move

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Philip Bays
Link does not work for me. Do not get the page. On Oct 6, 2008, at 11:51 AM, Robert Hanson wrote: is that Mac or Linux that the problem still exists? If Mac and Linux users could try at http://chemapps.stolaf.edu/jmol/docs/example-11/simple.htm I would appreciate knowing if the buttons alon

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Jeff Hansen
I tried the Load PDB, Load URL, Load File, and Save File buttons on Mac OS X 10.5.5, PPC, Java 1.5.0_16. All worked. The Load buttons all did exactly the same thing. Is that how they are supposed to work? With each I was able to open a pdb file from my local hard drive. I didn't attemp

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Rolf Huehne
Robert Hanson wrote: > is that Mac or Linux that the problem still exists? If Mac and Linux users > could try at http://chemapps.stolaf.edu/jmol/docs/example-11/simple.htm > > I would appreciate knowing if the buttons along the right side work for you. > Can you enter file names? Do they open the

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Robert Hanson
is that Mac or Linux that the problem still exists? If Mac and Linux users could try at http://chemapps.stolaf.edu/jmol/docs/example-11/simple.htm I would appreciate knowing if the buttons along the right side work for you. Can you enter file names? Do they open the correct files? save to the corr

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Rolf Huehne
Robert Hanson wrote: > On Thu, Oct 2, 2008 at 9:59 AM, Rolf Huehne <[EMAIL PROTECTED]> wrote: >> When I tried the "load/save" options from the popup menu with the signed >> applet on Linux I could not enter any filename directly (as was >> previously reported by someone else on MacOS). This is part

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-06 Thread Rolf Huehne
Robert Hanson wrote: > I have tentatively modified Jmol to make > > load "/xxx/xxx" > > for the application and the SIGNED applet default to > > load "file:/xxx/xxx" > > and for the UNSIGNED applet default to > > load "http://whatever.server/xxx/xxx"; > > when the applet is on a server

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-05 Thread Robert Hanson
I have tentatively modified Jmol to make load "/xxx/xxx" for the application and the SIGNED applet default to load "file:/xxx/xxx" and for the UNSIGNED applet default to load "http://whatever.server/xxx/xxx"; when the applet is on a server or load "file:/xxx/xxx" when it is local.

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-05 Thread Robert Hanson
On Thu, Oct 2, 2008 at 9:59 AM, Rolf Huehne <[EMAIL PROTECTED]> wrote: > Rolf Huehne wrote: > > 3) The "java.security.AccessControlException" problem still remains. I > > don't know if this is specific to our site because I can't check it > > with other sites. But it must be caused by changes int

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-04 Thread Robert Hanson
On Thu, Oct 2, 2008 at 4:26 PM, <[EMAIL PROTECTED]> wrote: > Quoting Robert Hanson <[EMAIL PROTECTED]>: > > > Rolf, > > > > First, realize that it's an unusual situation that you are in, accessing > > files through an absolute path on your web server. Most of us use > relative > > paths. > > > > T

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-04 Thread Rolf Huehne
Rolf Huehne wrote: > 3) The "java.security.AccessControlException" problem still remains. I > don't know if this is specific to our site because I can't check it > with other sites. But it must be caused by changes introduced after > 11.6.RC13 because the problem doesn't occur with this version or

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-02 Thread rhuehne
Quoting Robert Hanson <[EMAIL PROTECTED]>: > Rolf, > > First, realize that it's an unusual situation that you are in, accessing > files through an absolute path on your web server. Most of us use relative > paths. > > This is not a bug. The problem is that that now that the signed applet can > rea

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-02 Thread Robert Hanson
Rolf, First, realize that it's an unusual situation that you are in, accessing files through an absolute path on your web server. Most of us use relative paths. This is not a bug. The problem is that that now that the signed applet can read from the hard drive, if you just say: /xxx/xxx/xxx Jmo

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-02 Thread Angel Herraez
My problem with {selected}.y = 0 has been solved too in RC18 - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand

Re: [Jmol-users] Jmol 11.6 release -- delayed

2008-10-02 Thread Rolf Huehne
Robert Hanson wrote: > A few additional bugs were found just today; Nico has released 11.6.RC18 -- > those who found these bugs please check that they are fixed there, and we > will give it a few more days and release 11.6 this weekend. > 1) The problem with "vector_x = bound_box.x" is solved now

[Jmol-users] Jmol 11.6 release -- delayed

2008-10-01 Thread Robert Hanson
A few additional bugs were found just today; Nico has released 11.6.RC18 -- those who found these bugs please check that they are fixed there, and we will give it a few more days and release 11.6 this weekend. Thanks, Bob -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Ola