Bob,
I tried that, and it works with mouse control on my desktop, but the iPad has a
problem.
For the desktop/mouse, I can bind _rotateSelected to LEFT, and pick up the
click/select of a model with a hover call back. Binding LEFT to _rotateSelected
evidently loses the original click select of
why isn't it just
bind "LEFT" "_rotateSelected"
?
On Wed, Feb 20, 2013 at 9:46 AM, Otis Rothenberger wrote:
> Bob,
>
> To set up rotation of selected models on an iPad, I have to bind "LEFT" to
> the rotation so that I can eliminate the need for a modifier key. I'm using
> the following bindin
Bob,
To set up rotation of selected models on an iPad, I have to bind "LEFT" to the
rotation so that I can eliminate the need for a modifier key. I'm using the
following binding:
bind "LEFT" "rotateSelected Y @{_DELTAX*2};rotateSelected X @{_DELTAY*2}"
No matter what I use as a multiplier, I'm
Hi,
I finally got time to test it and it works like a charm. Thank you Bob!
Alex
- Ursprüngliche Mail -
> Von: "Robert Hanson"
> An: jmol-users@lists.sourceforge.net
> Gesendet: Dienstag, 9. November 2010 14:24:26
> Betreff: Re: [Jmol-users] rotate selected atoms
Curious about the "set picking dragmolecule" and the "compare" commands, I have
just made some tests with the latest jmol.jar file from Bob's repository
(12.1.22_dev).
I used a beta globin and an alpha globin pdb files, loaded in 2 different frames
the "set picking dragmolecule" command works fi
ailto:osrot...@chemagic.com>>
> An: jmol-users@lists.sourceforge.net
<mailto:jmol-users@lists.sourceforge.net>
> Gesendet: Dienstag, 9. November 2010 06:06:00
> Betreff: Re: [Jmol-users] rotate selected atoms using the mouse
> Hi Alexander and Bob-
&g
on does not matter. Pick/drag the
>> protein chain a moves just the protein chain a. Pick/drag plm moves the
>> protein chain a and all bond non protein molecules, including plm. This is
>> asymmetric, is there a rationale for that? Actually I do not mind, I just
>> want a wa
rotate, translate) only selected atoms using the mouse.
>
>
>
> - Ursprüngliche Mail -
> > Von: "Otis Rothenberger"
> > An: jmol-users@lists.sourceforge.net
> > Gesendet: Dienstag, 9. November 2010 06:06:00
> > Betreff: Re: [Jmol-users] rotate selecte
-
> Von: "Otis Rothenberger"
> An: jmol-users@lists.sourceforge.net
> Gesendet: Dienstag, 9. November 2010 06:06:00
> Betreff: Re: [Jmol-users] rotate selected atoms using the mouse
> Hi Alexander and Bob-
>
> I'm going to go out on a limb here and say that
Oh my. I had forgotten about this. If you actually open Bob's Jmol model
kit mode, turn the substrate pink:
set modelKitMode;set selectHetero on;select hetero;color pink
and use the drag (shift to rotate) commands to move the substrate
slightly out of place, then the drag/minimize command will
Hi Alexander and Bob-
I'm going to go out on a limb here and say that I think Alexander wants
to do something that's not as complex as it seems. While my description
below uses the links on my page, I am really just using Jmol's model kit
mode commands.
I'll use lactose permease (courtesy of
That's going to rotate the atoms about a specific molecular axis. Do you
want it to rotate about a specific window axis, regardless of how the model
is oriented? Is that the problem? There might be a way of doing that with
quaternions.
On Mon, Nov 8, 2010 at 12:39 PM, Alexander Rose wrote:
> Hi
Alexander,
I'm still a little confused about your objective. Try this. Go to:
http://chemagic.com/web_molecules/script_page_large.aspx
Click the Molecular Editor link. Click "duplicate." There are now two
models in the window. Click "move." After you click "move," either model
can be click/dr
Hi Otis,
Am 08.11.2010 um 20:22 schrieb Otis Rothenberger:
> Hi Alexander-
>
> I'm not sure exactly what you want to do, but if you want to
> independently translate or rotate non-bonded models, or rotate about a
> given bond (i.e. conformation rotation), then there is a really simple
> way t
Hi Alexander-
I'm not sure exactly what you want to do, but if you want to
independently translate or rotate non-bonded models, or rotate about a
given bond (i.e. conformation rotation), then there is a really simple
way to do either of these.
1) With one or more models in the same window, the
Hi,
>From the manual
"set allowRotateSelected FALSE
When set TRUE, this parameter allows user rotation of the molecule containing
the selected atom using the mouse (holding ALT down while dragging). The
coordinates of the rotated molecule will be sightly degraded in this process."
I would li
I really just want to use it as a quick and dirty way of editing
molecules without having to script each change -- especially for
macromolecules where the general shape can be more important for
visualisation than precise bond angles. It's certainly a niche feature
and if it's not intended to b
ah, ok. I see. Hard to believe this is going to be useful, considering the
degrees of freedom. How do you figure it will be used?
On Thu, Apr 30, 2009 at 9:26 AM, Chris Foley wrote:
> I'm afraid not. It appeared to work when the water molecule was selected.
> But all the atoms of HOH were selec
I'm afraid not. It appeared to work when the water molecule was
selected. But all the atoms of HOH were selected. When I tried
selecting a methyl group (select c13,h16,h17,h18) the whole caffeine
molecule was rotated.
In case it helps, I used Windows XP, Sun Java plugin 1.6.0_13 on
Internet Ex
Did it work at http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm
# 30?
On Thu, Apr 30, 2009 at 5:54 AM, Chris Foley wrote:
> Thanks for the reply Robert. I downloaded 11.7.33 but unfortunately I
> can't get the rotation to work. I can translate the atoms as you describe
> but can't rot
Thanks for the reply Robert. I downloaded 11.7.33 but unfortunately I
can't get the rotation to work. I can translate the atoms as you
describe but can't rotate them.
Also, is it possible to change the point the atoms rotate around? The
kind of thing I want to do is rotate a group around the a
It's in there, at least for Jmol 11.7. See
http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm
30. selective atom rotation and translation
# Using set dragSelected in Jmol 11.7.25 you can move selected atoms around,
translating them with ALT-SHIFT-LEFT mouse and rotating them around their
ge
Hi Jmol users,
I would like to be rotate the selected atoms with the mouse.
The rotateSelected command is almost perfect... but only works via
scripting, not mouse interaction.
The "allowrotateselected = true" setting is also close but rotates the
entire molecule, not just the selected atoms.
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