Re: [Libmesh-devel] Problems with clang on Mavericks

2013-10-24 Thread Kirk, Benjamin (JSC-EG311)
I've only gone so far as finding the proper mailing lists, but you'll have to subscribe first. Well done! On Oct 24, 2013, at 4:38 PM, "John Peterson" wrote: > Just to expand on this issue a bit: the bug is netcdf's fault, not clang's. > > In contrib/netcdf/4.3.0/ncgen3/genlib.h, they hav

Re: [Libmesh-devel] Problems with clang on Mavericks

2013-10-24 Thread John Peterson
Just to expand on this issue a bit: the bug is netcdf's fault, not clang's. In contrib/netcdf/4.3.0/ncgen3/genlib.h, they have the following: #ifndef HAVE_STRLCAT extern size_t strlcat(char *dst, const char *src, size_t siz); #endif which my compiler somehow reaches even though my system _does

[Libmesh-devel] Problems with clang on Mavericks

2013-10-24 Thread John Peterson
While libmesh builds fine on OSX 10.9 with a hand-built GCC, apparently the same cannot be said for a hand-built clang (or maybe any clang?). We specifically tried the following one (since it includes OpenMP support) $ clang++ --version > clang version 3.3.1 > (https://github.com/clang-omp/clang

Re: [Libmesh-devel] Apple changed XDR in OSX 10.9!

2013-10-24 Thread John Peterson
On Thu, Oct 24, 2013 at 11:39 AM, John Peterson wrote: > > > > On Thu, Oct 24, 2013 at 11:35 AM, Kirk, Benjamin (JSC-EG311) < > benjamin.k...@nasa.gov> wrote: > >> Well, crap. Go for it, I've got buildbot coverage of RHEL 5,6, OpenSUSE >> 12, and Ubuntu-LTS. >> >> Let me know if you'd like help w

Re: [Libmesh-devel] Apple changed XDR in OSX 10.9!

2013-10-24 Thread John Peterson
On Thu, Oct 24, 2013 at 11:35 AM, Kirk, Benjamin (JSC-EG311) < benjamin.k...@nasa.gov> wrote: > Well, crap. Go for it, I've got buildbot coverage of RHEL 5,6, OpenSUSE > 12, and Ubuntu-LTS. > > Let me know if you'd like help with an m4 test to look for the difference > during configure. > > I'm b

Re: [Libmesh-devel] Apple changed XDR in OSX 10.9!

2013-10-24 Thread Paul T. Bauman
Bless you for trying out 10.9. I've refused to move to either XCode 5.0 or OS X 10.9 for a least a few more weeks. On Thu, Oct 24, 2013 at 12:30 PM, John Peterson wrote: > And libmesh doesn't compile. Their reasoning is explained in the xdr.h > header file (pasted below). > > I'm going to make

Re: [Libmesh-devel] Apple changed XDR in OSX 10.9!

2013-10-24 Thread Kirk, Benjamin (JSC-EG311)
Well, crap. Go for it, I've got buildbot coverage of RHEL 5,6, OpenSUSE 12, and Ubuntu-LTS. Let me know if you'd like help with an m4 test to look for the difference during configure. I'm backing up my mac right now before upgrading to 10.9. I've also got a 10.7 box at my disposal we can t

[Libmesh-devel] Apple changed XDR in OSX 10.9!

2013-10-24 Thread John Peterson
And libmesh doesn't compile. Their reasoning is explained in the xdr.h header file (pasted below). I'm going to make a patch which passes a third parameter of zero as they suggest. It should continue to work on systems that support the varargs interface, but since this is a relatively low level

Re: [Libmesh-devel] Anyone successfully build libmesh with Intel 14 compilers?

2013-10-24 Thread Paul T. Bauman
I'll try this. I naively fired off a build last night on a machine that had 14.0.080 and while configure didn't set the flags, the build seemed to do OK. On Thu, Oct 24, 2013 at 10:34 AM, Kirk, Benjamin (JSC-EG311) < benjamin.k...@nasa.gov> wrote: > On Oct 23, 2013, at 4:58 PM, John Peterson wr

Re: [Libmesh-devel] Anyone successfully build libmesh with Intel 14 compilers?

2013-10-24 Thread Kirk, Benjamin (JSC-EG311)
On Oct 23, 2013, at 4:58 PM, John Peterson wrote: > They are using the Intel 14 compilers, and some library which uses > libmesh. It would be good if we could help them out... I just committed the minimum fix I expect is necessary. I have not been able to get the compilers yet, so I can't sw