Guys, we're seeing a build error with the new netcdf on Linux:
CXXLDgetpot_parse-opt
./.libs/libmesh_opt.so: undefined reference to `nc_def_var_deflate'
collect2: ld returned 1 exit status
make[1]: *** [getpot_parse-opt] Error 1
make[1]: Leaving directory `/home/gastdr/projects/herd_trunk/li
This is consistent across multiple different distros and architectures...
you guys gotta be seeing this, right?
We're looking for a fix now...
Derek
On Tue, Feb 12, 2013 at 11:58 AM, Derek Gaston wrote:
> Guys, we're seeing a build error with the new netcdf on Linux:
>
> CXXLDgetpot_par
Yep, I'm on it.
This happens when HDF5 is not properly found, disabling netcdf4, but exodusII
is still looking for that symbol.
You can get the old stuff back with
$ ./configure --with-netcdf=old --with-exodus=old --with-nemesis=old
but I should have it fixed shortly.
-Ben
On Feb 12, 2013,
Didn't CC the list...
-- Forwarded message --
From: Derek Gaston
Date: Tue, Feb 12, 2013 at 12:27 PM
Subject: Re: [Libmesh-devel] Build Error
To: "Kirk, Benjamin (JSC-EG311)"
On Tue, Feb 12, 2013 at 12:24 PM, Kirk, Benjamin (JSC-EG311) <
benjamin.kir...@nasa.gov> wrote:
> This
I think it is possible to use the new exodus even with the netcdf4 symbols
missing, but I'm not sure yet what aspect of the new functionality will be
reduced.
-Ben
On Feb 12, 2013, at 1:28 PM, "Derek Gaston"
mailto:fried...@gmail.com>> wrote:
Didn't CC the list...
-- Forwarded mess
Ok - we'll just stick to the old stuff for now until we can distribute HDF5.
Derek
On Tue, Feb 12, 2013 at 12:55 PM, Kirk, Benjamin (JSC-EG311) <
benjamin.kir...@nasa.gov> wrote:
> I think it is possible to use the new exodus even with the netcdf4 symbols
> missing, but I'm not sure yet what as
Here's another "new" error when using the new contribs:
Exodus Library Error: [ex_put_block]
Error: failed to define number of nodes/entity for element block 507 in
file id 131072
[-41] netcdf constraint NC_MAX_DIMS exceeded
Error writing element block.
Stack frames: 14
0: 0 libmesh_dbg.0.dyli
On Feb 12, 2013, at 2:13 PM, Cody Permann wrote:
> We have a number of tests that have started failing that use several hundred
> subdomains. I haven't dived into this at all yet, but on the surface it
> looks like we might need to call additional API functions or something in our
> ExodusII
On Tue, Feb 12, 2013 at 1:23 PM, Kirk, Benjamin (JSC-EG311) <
benjamin.kir...@nasa.gov> wrote:
>
> On Feb 12, 2013, at 2:13 PM, Cody Permann wrote:
>
> > We have a number of tests that have started failing that use several
> hundred subdomains. I haven't dived into this at all yet, but on the
>
On Feb 12, 2013, at 2:49 PM, Cody Permann wrote:
>
> I need to increase some parameter bounds in netcdf - I'm doing that and will
> commit a fix if it still works.
>
> Excellent!
> Cody
It is in as of 4695b094f00c1076be21241050942414a2f22ac2
-Ben
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