Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
I think LyX 2.0.3 looks good now. The Sweave manual is accessible via Help=Specific Manuals. The LyX wiki has been updated as well. Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State University 2215 Snedecor Hall, Ames,

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Graham Smith
Yihui On Monday, 5 March 2012, Yihui Xie x...@yihui.name wrote: I think LyX 2.0.3 looks good now. The Sweave manual is accessible via Help=Specific Manuals. The LyX wiki has been updated as well. I have only briefly looked at this, but I also see that Kintr is now a module. Graham

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
That is right. It is one thing in LyX that I most wanted to do, and I was quite happy that it was accepted. I no longer have to tell other users to use dark voodoos. Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
I think LyX 2.0.3 looks good now. The Sweave manual is accessible via Help=Specific Manuals. The LyX wiki has been updated as well. Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State University 2215 Snedecor Hall, Ames,

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Graham Smith
Yihui On Monday, 5 March 2012, Yihui Xie x...@yihui.name wrote: I think LyX 2.0.3 looks good now. The Sweave manual is accessible via Help=Specific Manuals. The LyX wiki has been updated as well. I have only briefly looked at this, but I also see that Kintr is now a module. Graham

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
That is right. It is one thing in LyX that I most wanted to do, and I was quite happy that it was accepted. I no longer have to tell other users to use dark voodoos. Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
I think LyX 2.0.3 looks good now. The Sweave manual is accessible via Help=>Specific Manuals. The LyX wiki has been updated as well. Regards, Yihui -- Yihui Xie Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State University 2215 Snedecor Hall,

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Graham Smith
Yihui On Monday, 5 March 2012, Yihui Xie wrote: > I think LyX 2.0.3 looks good now. The Sweave manual is accessible via > Help=>Specific Manuals. The LyX wiki has been updated as well. I have only briefly looked at this, but I also see that Kintr is now a module. Graham

Re: Sweave Snow Leopard and lyx 2.0

2012-03-04 Thread Yihui Xie
That is right. It is one thing in LyX that I most wanted to do, and I was quite happy that it was accepted. I no longer have to tell other users to use dark voodoos. Regards, Yihui -- Yihui Xie Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui As far as I know, there is no such a package named literate, and the Sweave module does not rely on noweb.sty (this seems to be a common misunderstanding about Sweave in LyX). I'm sort of lost in the discussion and do not know what is the problem right now. Sorry for the delay in

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Yihui Xie
You are absolutely right -- too many instructions around. I wished I could make a comprehensive documentation of Sweave in LyX, but did not manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui, You are absolutely right -- too many instructions around. I wished I could make a comprehensive documentation of Sweave in LyX, but did not manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... Yes, some up to date, and detailed instructions would be very useful.

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui As far as I know, there is no such a package named literate, and the Sweave module does not rely on noweb.sty (this seems to be a common misunderstanding about Sweave in LyX). I'm sort of lost in the discussion and do not know what is the problem right now. Sorry for the delay in

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Yihui Xie
You are absolutely right -- too many instructions around. I wished I could make a comprehensive documentation of Sweave in LyX, but did not manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui, You are absolutely right -- too many instructions around. I wished I could make a comprehensive documentation of Sweave in LyX, but did not manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... Yes, some up to date, and detailed instructions would be very useful.

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui As far as I know, there is no such a package named literate, and the > Sweave module does not rely on noweb.sty (this seems to be a common > misunderstanding about Sweave in LyX). > > I'm sort of lost in the discussion and do not know what is the problem > right now. > Sorry for the delay

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Yihui Xie
You are absolutely right -- too many instructions around. I wished I could make a comprehensive documentation of Sweave in LyX, but did not manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... Regards, Yihui -- Yihui Xie Phone: 515-294-2465 Web:

Re: Sweave Snow Leopard and lyx 2.0

2011-09-02 Thread Graham Smith
Yihui, > You are absolutely right -- too many instructions around. I wished I > could make a comprehensive documentation of Sweave in LyX, but did not > manage to do it before LyX 2.0.1. Perhaps we can do it in 2.0.2... > Yes, some up to date, and detailed instructions would be very useful.

Re: Sweave Snow Leopard and lyx 2.0

2011-08-23 Thread Yihui Xie
As far as I know, there is no such a package named literate, and the Sweave module does not rely on noweb.sty (this seems to be a common misunderstanding about Sweave in LyX). I'm sort of lost in the discussion and do not know what is the problem right now. The Sweave module mainly depends on

Re: Sweave Snow Leopard and lyx 2.0

2011-08-23 Thread Yihui Xie
As far as I know, there is no such a package named literate, and the Sweave module does not rely on noweb.sty (this seems to be a common misunderstanding about Sweave in LyX). I'm sort of lost in the discussion and do not know what is the problem right now. The Sweave module mainly depends on

Re: Sweave Snow Leopard and lyx 2.0

2011-08-23 Thread Yihui Xie
As far as I know, there is no such a package named literate, and the Sweave module does not rely on noweb.sty (this seems to be a common misunderstanding about Sweave in LyX). I'm sort of lost in the discussion and do not know what is the problem right now. The Sweave module mainly depends on

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed, this file was produced in Lyx 2.0 in Ubuntu

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Liviu Andronic
On Sun, Aug 21, 2011 at 8:06 AM, Graham Smith myotis...@gmail.com wrote: I have attached the file that is giving me the problems and just in case it as been missed, this file was produced in Lyx 2.0 in Ubuntu 11.04.  It was the Mac that had 1.6 on it, which I upgraded to 2.0 before trying to

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Liviu, Many many thanks for this, I knew I would need to edit the file path once I started working with the file, but didn't realise that it could cause an error about installed classes when simply loading the file. No changed ~/Dropbox/projects/R_Anova/Data/Ian.txt When I was regularly

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 20/08/2011 12:40 PM, Graham Smith wrote: I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 21/08/2011 2:06 AM, Graham Smith wrote: Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed,

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien The error message that you get should have pointed you to Section 3.1.2.3 of the User's Guide. The message says that a literate-latex converter is missing (although not stated, usually this would be noweave), it also says that the LaTeX package noweb.sty is missing. Is the error

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien If this file was created with LyX 1.6 and then converted to LyX 2.0, you might have found a bug in the conversion routine. Do you have a sample LyX 1.6 file which reproduces the problem when opened in 2.0? Thanks for the comment about noweb and sweave, I wasn't sure if I needed

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
With a follow up to a follow up, Thanks for the comment about noweb and sweave, I wasn't sure if I needed both. I knew I needed Sweave, just not sure about noweb. The errror message, as suggested by Julien, was indeed linked to trying to load the noweb module. Removing the noweb module

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed, this file was produced in Lyx 2.0 in Ubuntu

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Liviu Andronic
On Sun, Aug 21, 2011 at 8:06 AM, Graham Smith myotis...@gmail.com wrote: I have attached the file that is giving me the problems and just in case it as been missed, this file was produced in Lyx 2.0 in Ubuntu 11.04.  It was the Mac that had 1.6 on it, which I upgraded to 2.0 before trying to

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Liviu, Many many thanks for this, I knew I would need to edit the file path once I started working with the file, but didn't realise that it could cause an error about installed classes when simply loading the file. No changed ~/Dropbox/projects/R_Anova/Data/Ian.txt When I was regularly

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 20/08/2011 12:40 PM, Graham Smith wrote: I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 21/08/2011 2:06 AM, Graham Smith wrote: Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed,

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien The error message that you get should have pointed you to Section 3.1.2.3 of the User's Guide. The message says that a literate-latex converter is missing (although not stated, usually this would be noweave), it also says that the LaTeX package noweb.sty is missing. Is the error

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien If this file was created with LyX 1.6 and then converted to LyX 2.0, you might have found a bug in the conversion routine. Do you have a sample LyX 1.6 file which reproduces the problem when opened in 2.0? Thanks for the comment about noweb and sweave, I wasn't sure if I needed

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
With a follow up to a follow up, Thanks for the comment about noweb and sweave, I wasn't sure if I needed both. I knew I needed Sweave, just not sure about noweb. The errror message, as suggested by Julien, was indeed linked to trying to load the noweb module. Removing the noweb module

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed, this file was produced in Lyx 2.0 in Ubuntu

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Liviu Andronic
On Sun, Aug 21, 2011 at 8:06 AM, Graham Smith wrote: > I have attached the file that is giving me the problems and just in case it > as been missed, this file was produced in Lyx 2.0 in Ubuntu 11.04.  It was > the Mac that had 1.6 on it, which I upgraded to 2.0 before trying

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Liviu, Many many thanks for this, I knew I would need to edit the file path once I started working with the file, but didn't realise that it could cause an error about installed classes when simply loading the file. No changed "~/Dropbox/projects/R_Anova/Data/Ian.txt" When I was regularly

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 20/08/2011 12:40 PM, Graham Smith wrote: I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Julien Rioux
On 21/08/2011 2:06 AM, Graham Smith wrote: Further to this, I have now created a small file from scratch with a single chunk of R code and it seems to work fine. article class and Sweave module loaded. I have attached the file that is giving me the problems and just in case it as been missed,

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien >> > The error message that you get should have pointed you to Section 3.1.2.3 > of the User's Guide. The message says that a literate->latex converter is > missing (although not stated, usually this would be noweave), it also says > that the LaTeX package noweb.sty is missing. > > Is the

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
Julien > If this file was created with LyX 1.6 and then converted to LyX 2.0, you > might have found a bug in the conversion routine. Do you have a sample LyX > 1.6 file which reproduces the problem when opened in 2.0? > > Thanks for the comment about noweb and sweave, I wasn't sure if I needed

Re: Sweave Snow Leopard and lyx 2.0

2011-08-21 Thread Graham Smith
With a follow up to a follow up, > Thanks for the comment about noweb and sweave, I wasn't sure if I needed > both. I knew I needed Sweave, just not sure about noweb. > The errror message, as suggested by Julien, was indeed linked to trying to load the noweb module. Removing the noweb module

Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am missing literate-latex noweb.sty I know lyx 2.0

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Just to add to this, I have updated to Mactex 2011, and found the the Tex live utlity, but cannot find a package called literate. I have updated all run texhash and reconfigured lyx, but still the same error. Thanks, Graham On 20 August 2011 17:40, Graham Smith myotis...@gmail.com wrote: I

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Liviu Andronic
On Sat, Aug 20, 2011 at 10:29 PM, Graham Smith myotis...@gmail.com wrote: Just to add to this, I have updated to Mactex 2011, and found the the Tex live utlity, but cannot find a package called literate. Have you tried Document Settings Modules Sweave? And Settings Class Article (or

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Liviu, Thanks for the reply. I'm afraid I don't understand what you are asking me to try. As the doc has already worked with SWeave, the modules SWeave and Noweb are loaded automatically, which is why I assume I am getting the error as soon as I open the document the lyx. And again the article

Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am missing literate-latex noweb.sty I know lyx 2.0

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Just to add to this, I have updated to Mactex 2011, and found the the Tex live utlity, but cannot find a package called literate. I have updated all run texhash and reconfigured lyx, but still the same error. Thanks, Graham On 20 August 2011 17:40, Graham Smith myotis...@gmail.com wrote: I

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Liviu Andronic
On Sat, Aug 20, 2011 at 10:29 PM, Graham Smith myotis...@gmail.com wrote: Just to add to this, I have updated to Mactex 2011, and found the the Tex live utlity, but cannot find a package called literate. Have you tried Document Settings Modules Sweave? And Settings Class Article (or

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Liviu, Thanks for the reply. I'm afraid I don't understand what you are asking me to try. As the doc has already worked with SWeave, the modules SWeave and Noweb are loaded automatically, which is why I assume I am getting the error as soon as I open the document the lyx. And again the article

Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
I am trying to get Sweave to work with lyx 2.0 on Snow leopard with Mactex 2010 I had Lyx 1.6 working fine, but uninstalled before installing lyx 2.0 Opening a file in Lyx 2.0 (originally from Ubuntu 11.04 and lyx 2.0) gives me an error that I am missing literate-latex noweb.sty I know lyx 2.0

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Just to add to this, I have updated to Mactex 2011, and found the the Tex live utlity, but cannot find a package called "literate". I have updated "all" run texhash and reconfigured lyx, but still the same error. Thanks, Graham On 20 August 2011 17:40, Graham Smith wrote:

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Liviu Andronic
On Sat, Aug 20, 2011 at 10:29 PM, Graham Smith wrote: > Just to add to this, I have updated to Mactex 2011, and found the the Tex > live utlity, but cannot find a package called "literate". > Have you tried Document > Settings > Modules > Sweave? And Settings > Class >

Re: Sweave Snow Leopard and lyx 2.0

2011-08-20 Thread Graham Smith
Liviu, Thanks for the reply. I'm afraid I don't understand what you are asking me to try. As the doc has already worked with SWeave, the modules SWeave and Noweb are loaded automatically, which is why I assume I am getting the error as soon as I open the document the lyx. And again the article