re: strange gfortran problem

2012-05-05 Thread Sean Farley
(cc'ing macports-dev) The problem is actually with MacPorts 4.3.2. A little more accurately, this is NOT an actual bug. The problem is that the behavior you are seeing is allowed under the Fortran standard -- that's why selected_int_kind exists in the first place. This is wrong. The

Re: Trying to install ld64 port from source, but binaries installed instead?

2012-05-09 Thread Sean Farley
I just tried to port install ld64, and instead of compiling from source, it downloads a .tbz2 package from packages.macports.org which contains the binaries. I guess I thought macports always built from source unless you added pkg to the port command? Thanks for any help. This is a newer

Re: gfortran with Xcode 4.3.2 unreliable

2012-06-09 Thread Sean Farley
There was a thread ~1 month ago regarding gfortran that was acting strangely.  Here's a link to that thread: http://lists.macosforge.org/pipermail/macports-dev/2012-May/019098.html I haven't seen any responses or anything to this, and I was wondering if anyone else had run into issues trying

Re: Build Petsc with Shared Libraries

2012-07-18 Thread Sean Farley
The libraries have not been linked correctly. I assume the first line in otool -L /opt/local/lib/petsc/lib/libpetsc.dylib contains the worksrcdir, which causes this issue when linking against it. Please file a bug so the maintainer can fix this. The PETSc portfile is very wrong, particularly

Re: Build Petsc with Shared Libraries

2012-07-19 Thread Sean Farley
Sean, it's up to the maintainers of those ports as to whether they would like to incorporate your changes, and for the petsc port, I would encourage you to file a bug report with a diff with these changes and explanations about why the changes need to be made. That actually was my plan but

Re: Build Petsc with Shared Libraries

2012-07-19 Thread Sean Farley
I see that you use many variants in your Portfile. As a rule of thumb most functionality should be enabled by default. Couldn’t most be enabled by default (possibly as a default_variant)? Sure; I have no preference either way. My only note is that the --download-* options shouldn't be used

Re: Oddity using Xcode 4.4 on OS 10.7.

2012-07-27 Thread Sean Farley
I'm curious if this is still happening. If anyone sees this issue when initiating the install from XCode's preferences (*after* this email), please let me know. I can try later this afternoon, if not before and let you (and the list) know. ___

Re: Problem intalling Pandoc

2012-09-28 Thread Sean Farley
On Fri, Sep 28, 2012 at 8:41 AM, Ryan Schmidt ryandes...@macports.org wrote: On Sep 28, 2012, at 06:27, Trémouilles David david.t...@gmail.com wrote: --- Fetching archive for hs-pandoc-types --- Attempting to fetch hs-pandoc-types-1.8_0.darwin_11.x86_64.tbz2 from

Re: pandoc

2012-11-03 Thread Sean Farley
On Sat, Nov 3, 2012 at 7:04 PM, Clemens Lang c...@macports.org wrote: On Sat, Nov 03, 2012 at 03:23:27PM -0400, Lenore Horner wrote: I see there is a ticket from a few weeks ago that may be related, but there's not closure or work-around suggested. https://trac.macports.org/ticket/36608 The

Re: ipython3 port not working ?

2012-12-03 Thread Sean Farley
On Mon, Dec 3, 2012 at 11:06 PM, Trémouilles David david.t...@gmail.com wrote: Hello, Is ipython3 working for you ? I have a few patches that update ipython to 0.13.1 and correctly fixes a missing py-matplotlib dependency. That might be what you're seeing here, but I'm not 100% sure. (I'll be

Re: running script error (eigen symmetric)

2012-12-04 Thread Sean Farley
On Mon, Dec 3, 2012 at 10:35 AM, Amy Anderson amyla...@gmail.com wrote: Dear macports-users, I am a new macports, python, and scipy user and I am looking for some help to troubleshoot an error I have been getting when trying to run a script in python. The script I am trying to run is called

Re: ipython3 port not working ?

2012-12-04 Thread Sean Farley
On Tue, Dec 4, 2012 at 12:25 PM, Trémouilles David david.t...@gmail.com wrote: Maybe I was not precise enough. I meant py33-ipython ipython version for python33. Are your running precisely this version with the few patches you mentioned ? Yep, I understood. I still don't know how that path of

Re: Cairo Failed to Build

2012-12-09 Thread Sean Farley
On Sun, Dec 9, 2012 at 11:55 PM, Jasper Frumau jasperfru...@gmail.com wrote: cairo failed to build. Here is the tail of the main log: tail -n 20 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-cairo/py25-cairo/main.log :info:build

Re: py25-cairo Fails to build

2012-12-10 Thread Sean Farley
On Mon, Dec 10, 2012 at 12:47 PM, Rodolfo Aramayo raram...@gmail.com wrote: I am experiencing problems building py25-cairo in all my computers I am attaching the log file Will wait for ideas before filing a bug report? This is due to py25-cairo needing to have an older version of py2cairo, as

Re: Cairo Failed to Build

2012-12-10 Thread Sean Farley
On Mon, Dec 10, 2012 at 12:01 AM, Jasper Frumau jasperfru...@gmail.com wrote: Thanks Sean. Looking forward to the patch! Ok, I've just posted my patches to get it working here: https://trac.macports.org/ticket/37254 Hopefully, they can be tested and committed by a macports developer soon. Let

Re: running script error (eigen symmetric)

2012-12-17 Thread Sean Farley
On Mon, Dec 17, 2012 at 3:46 PM, Amy Anderson amyla...@gmail.com wrote: Hi macport users, I am trying to run this script in python and the script is now working with the test data (eigen problem solved) but when I input my own data to be called by script I got the following errors.

Re: Using -std=c++11 with the macports gcc-4.7 compiler

2013-01-15 Thread Sean Farley
On Mon, Jan 14, 2013 at 8:32 AM, David Barto dba...@visionpro.com wrote: fails because the /usr/lib/libstdc++.so is found first. What can I do to find the proper /opt/local/lib/libstdc++.so? I've not modified the search paths in any way, I'm just trying to compile a c++ program using the

Re: Using -std=c++11 with the macports gcc-4.7 compiler

2013-01-16 Thread Sean Farley
On Wed, Jan 16, 2013 at 7:16 PM, Jeremy Huddleston Sequoia jerem...@apple.com wrote: On Jan 15, 2013, at 8:52 AM, Sean Farley s...@macports.org wrote: On Mon, Jan 14, 2013 at 8:32 AM, David Barto dba...@visionpro.com wrote: fails because the /usr/lib/libstdc++.so is found first. What can I do

Re: Using -std=c++11 with the macports gcc-4.7 compiler

2013-01-16 Thread Sean Farley
On Wed, Jan 16, 2013 at 9:19 PM, Jeremy Huddleston Sequoia jerem...@macports.org wrote: On Jan 16, 2013, at 17:49, Sean Farley s...@macports.org wrote: On Wed, Jan 16, 2013 at 7:16 PM, Jeremy Huddleston Sequoia jerem...@apple.com wrote: On Jan 15, 2013, at 8:52 AM, Sean Farley s

Re: Using -std=c++11 with the macports gcc-4.7 compiler

2013-01-16 Thread Sean Farley
On Wed, Jan 16, 2013 at 9:32 PM, Ryan Schmidt ryandes...@macports.org wrote: On Jan 16, 2013, at 19:49, Sean Farley wrote: On Wed, Jan 16, 2013 at 7:16 PM, Jeremy Huddleston Sequoia wrote: That being said, is there something wrong with clang++ that is causing you to try g++ instead

Re: Using -std=c++11 with the macports gcc-4.7 compiler

2013-01-16 Thread Sean Farley
On Wed, Jan 16, 2013 at 10:06 PM, Jeremy Huddleston Sequoia jerem...@macports.org wrote: On Jan 16, 2013, at 19:44, Sean Farley s...@macports.org wrote: I personally have had clang++ bugs with libmesh, moose, armadillo, and dolfin. There are plenty of g++ bugs as well ;) … have you filed

Re: Side effects?

2013-01-31 Thread Sean Farley
On Thu, Jan 31, 2013 at 7:34 PM, Ian Wadham iandw...@gmail.com wrote: On 01/02/2013, at 11:05 AM, Ryan Schmidt wrote: On Jan 31, 2013, at 16:53, Ian Wadham wrote: I did sudo port install -k -s pallet Single-letter flags like -k and -s have no effect unless you put them immediately after the

Re: Side effects?

2013-01-31 Thread Sean Farley
On Thu, Jan 31, 2013 at 8:25 PM, Lawrence Velázquez lar...@macports.org wrote: On Jan 31, 2013, at 8:46 PM, Sean Farley s...@macports.org wrote: I just want to point out that this is where having a gui that is open source would really help: the responsibility wouldn't have to be shouldered

Re: emacs-mac-app port build failure

2013-02-14 Thread Sean Farley
Marion Dumas writes: Hello, I wanted to de-install and re-install Emacs on my mac (10.5.8). I de- installed Emacs.app by simply deleting the contents. I then downloaded the emacsformac dmg installer but it just doesn't work: the application crashes at launch. I tried installing

Re: emacs-mac-app port build failure

2013-02-14 Thread Sean Farley
On Thu, Feb 14, 2013 at 4:04 PM, Lawrence Velázquez lar...@macports.org wrote: On Feb 14, 2013, at 4:44 PM, Marion Dumas mario...@gmail.com wrote: I wanted to de-install and re-install Emacs on my mac (10.5.8). I de-installed Emacs.app by simply deleting the contents. I then downloaded the

Re: Suggestion: Time to Use Trello?

2013-06-28 Thread Sean Farley
On Wed, Jun 26, 2013 at 7:27 AM, Rainer Müller rai...@macports.org wrote: On 2013-06-26 13:19, Rodolfo Aramayo wrote: Many projects out there are transitioning to trello https://trello.com/ What the heck does it do? The website tells me something about organizing things. There seems to be

Re: building my own ports of py27-matplotib and py27-numpy

2013-11-14 Thread Sean Farley
On Thu, Nov 14, 2013 at 8:29 PM, Arturo Rinaldi arty.n...@gmail.com wrote: Il 15/11/13 01:37, Ryan Schmidt ha scritto: On Nov 14, 2013, at 15:27, Arturo Rinaldi wrote: Hi folks, I need some help to build my own port of these two packages. I want to update them to their latest version (1.3.1

Re: help on 'Xcode tool not installed'

2014-02-17 Thread Sean Farley
Shiyuan gshy2...@gmail.com writes: Hi all, I am on Mac 10.8.5 and Xcode 5.0.2 is installed. From Xcode Preference/Downloads, I can see that the command line tool is installed. I also installed again the command line too (released in 10/2013)l from the following link

Re: MacPorts automake and python

2014-03-20 Thread Sean Farley
Adam Mercer r...@macports.org writes: Hi Since automake was bumped to 1.14.1_1 it can't be used to build any python software outside of MacPorts as it always tries to install the python modules into MacPorts prefix. I understand why we want to ensure that ports always installs modules into

Re: MacPorts automake and python

2014-03-20 Thread Sean Farley
Adam Mercer r...@macports.org writes: On Thu, Mar 20, 2014 at 2:55 PM, Sean Farley s...@macports.org wrote: I tend to agree with you but need help seeing how this worked before. What path did automake pick up before this change? If you look at the patch you can see the original paths

Re: can't upgrade py27-zmq

2014-04-14 Thread Sean Farley
Comer Duncan comer.dun...@gmail.com writes: I have today run across a failure to update py27-zmq. The output seems non-instructive so I am hoping to get some help. I paste the output of my attempt here: comermacpro:MarkFiniteDiffDerivativs comerduncan$ sudo port upgrade py27-zmq Ah,

Re: fortran compiler for f2py

2014-08-13 Thread Sean Farley
Clemens Lang writes: Hi, Run port select to read the help message about the select mechanism. I would think it's also documented elsewhere in more detail, though not, apparently, via port help select. It is, in 2.3.1, but not in trunk. See

Re: dolfin issue

2014-09-30 Thread Sean Farley
Ryan Schmidt writes: On Sep 29, 2014, at 7:45 PM, Gideon Simpson wrote: I don’t seem to have that file Ok, looks like the compiler name is just being specified as mpicc-mpich-mp, without a path, and cmake is incorrectly inferring that it is in the build directory. Do you have any of

Re: dolfin issue

2014-09-30 Thread Sean Farley
Gideon Simpson writes: I did a port uninstall and a port clean, and I got the same error. Huh. I'll try to reproduce this, then. I do have petsc/slepc installed with mpich, if that’s part of the problem. I suspect that petsc is built as a C library, while dolfin is C++. Perhaps that’s

Re: Error installing petsc

2014-10-10 Thread Sean Farley
Daniel Watkins writes: I attempted to install petsc using the command sudo port install petsc +mpich +superlu +suitesparse and was unsuccessful. The log file is attached. Ouch. This appears to be a compiler bug with clang. What OS and version of Xcode are you running?

Re: dolfin petsc

2014-10-17 Thread Sean Farley
Gideon Simpson writes: I have macports petsc 3.5.2 installed, and i tried installing sudo port install dolfin +mpich +suitesparse +petsc +slepc. I got an error that looks like there was some break in the functionality of Petsc, at least with regard to dolfin:

Re: Installing Metis V4

2014-10-23 Thread Sean Farley
Jeremy Lavergne writes: It seems parmetis is still version 4.0.3. Unfortunately, parmetis is not the same as metis. George decided to keep two separate projects. I have done the leg work to make parmetis depend on metis. On Oct 23, 2014, at 10:01 AM, L.Bryce Whitson Jr. wrote: I have a

Re: Yosemite buildbot?

2014-11-06 Thread Sean Farley
Brandon Allbery writes: On Sun, Oct 19, 2014 at 8:52 PM, Jason Mitchell jason-macpo...@maiar.org wrote: Is there a buildbot in the works for Yosemite ports? I checked https://build.macports.org/buildslaves but didn't see anything for Yosemite yet. Maybe I've misunderstood the process,

Re: dolfin 1.5.0 and OS X 10.9

2015-01-27 Thread Sean Farley
Gideon Simpson writes: On one my machines I still have 10.9 installed and with the recent update to dolfin (which works fine on my 10.10 machine), I now get errors during the build:

Re: Processing of port freecad fails

2015-01-09 Thread Sean Farley
Ryan Schmidt writes: On Jan 9, 2015, at 1:16 PM, Marius Schamschula wrote: freecad used to declare +gcc48 as the default variant until https://trac.macports.org/changeset/130949 was committed. Given that this change set deleted fortran related default variants for a number of

Re: Processing of port freecad fails

2015-01-09 Thread Sean Farley
Ryan Schmidt writes: On Jan 9, 2015, at 1:34 PM, Sean Farley wrote: Ryan Schmidt writes: On Jan 9, 2015, at 1:16 PM, Marius Schamschula wrote: freecad used to declare +gcc48 as the default variant until https://trac.macports.org/changeset/130949 was committed. Given

Re: ipython notebook problem

2015-06-19 Thread Sean Farley
Peter Danecek peter.dane...@ingv.it writes: Any news on this? Or should I have a look at it? Ack, I completely forgot about this. If you can do it, that'd be great. ___ macports-users mailing list macports-users@lists.macosforge.org

Re: ipython notebook problem

2015-06-16 Thread Sean Farley
Gideon Simpson gideon.simp...@gmail.com writes: This appears to have something to do with the recent upgrade of py27-jsonschema from 2.4.0 to 2.5.1. As soon as I downgraded this to the earlier version, things ran as they had in the past. -gideon Yep, it would seem there is a new

Re: ipython notebook problem

2015-06-17 Thread Sean Farley
Peter Danecek peter.dane...@ingv.it writes: Hi all, should this thread become a ticket? This issue was observed by a one of my colleagues as well. I have not YET run into it. I was going to get around to doing it tonight at our python group meetup, if no one else got to it before then.

Re: OS X 10.11 status

2015-08-19 Thread Sean Farley
Dominik Reichardt domi...@gmail.com writes: Hi, I’m itching to switch but often need MacPorts. Do any of you have experience yet with it *AND* MacPorts? Join the club :-( In previous switches, I switched by using the development version of MacPorts and following the migration steps of

Re: MacPorts 2.3.4 has been released

2015-10-01 Thread Sean Farley
Joshua Root writes: > The MacPorts Project is pleased to announce the release of version > 2.3.4. This is a bugfix release with small changes only. See the > ChangeLog [1] for the list of changes. Thanks man! ___ macports-users

Re: IPython 4.0 and Jupyter in MacPorts

2016-01-03 Thread Sean Farley
Fielding, Eric J (329A) writes: > I only use IPython occasionally, so I just now found out that the new version > of IPython 4.0 has major changes, and MacPorts has installed the new version > in one of my port upgrades. We used to run “ipython notebook” to get

Re: New Mac OS Forge administrator

2015-11-20 Thread Sean Farley
Ryan Schmidt writes: > Dear MacPorts users and developers, > > I'm pleased finally to be able to tell you that I have been hired to be your > new Mac OS Forge administrator. I have been involved in improving MacPorts > for years as a committer and as a manager, and

Re: numpy/scipy and mkl

2016-06-17 Thread Sean Farley
Ryan Schmidt writes: >> On Jun 11, 2016, at 10:11 AM, Gideon Simpson >> wrote: >> >> I have an intel mkl license, and I know that numpy/scipy can be built >> against it for a performance boost. I was wondering two things: >> >> 1. Is it

Re: dolfin on el capitan

2016-02-08 Thread Sean Farley
Gideon Simpson writes: > Since vtk5 seems to be broken on el capitan, dolfin won’t install. Is it > possible to work around that? Is there a ticket for this? I have vtk5+python+tcltk installed just fine. ___ macports-users

Re: py33-scipy problem

2016-01-26 Thread Sean Farley
Jerry writes: > On Jan 21, 2016, at 9:20 PM, David Strubbe wrote: > > David, thank you for this explanation. Installing py33-scipy +gfortran > worked. However, I have these notes. > >> As the message says, you need to select a Fortran variant. You

Re: pypy 5.0.0 failing to build...

2016-03-11 Thread Sean Farley
Carlo Tambuatco writes: > Upgrading pypy @4.0.1_0 to pypy @5.0.0 fails with following error: > > Building pypy > Error: org.macports.build for port pypy returned: command execution failed > Please see the log file for port pypy for details: > >

Re: pypy 5.0.0 failing to build...

2016-03-11 Thread Sean Farley
Carlo Tambuatco writes: > Uninstalling pypy @4.0.1_0 and installing pypy @5.0.0 seems to have done the > trick. > > What went wrong? It seems that pypy looks for an installed version. ___ macports-users mailing list

Re: py-hgsubversion install fails

2016-03-19 Thread Sean Farley
j. van den hoff writes: > if it helps, I'll type in everything you want (expect `/bin/rm -r' I mean > ;-)) to get more info and solve the issue. just let me know (possibly > off-list as well). My best guess at debugging would be to clean and extract the port: $ sudo

Re: py-hgsubversion install fails

2016-03-19 Thread Sean Farley
j. van den hoff writes: > on one of two machines (both running 10.10.5 and current `port') > installation of py-hgsubversion fails with (end of logfile): > > 8<-- > ... >

Re: py-hgsubversion install fails

2016-03-19 Thread Sean Farley
j. van den hoff <veedeeh...@gmail.com> writes: > On Wed, 16 Mar 2016 19:41:39 +0100, Sean Farley <s...@macports.org> wrote: > >> >> j. van den hoff <veedeeh...@gmail.com> writes: >> >>> on one of two machines (both running 10.10.5 and curren