Hi!
You might be interested in MartScript,
http://github.com/joejimbo/MartScript, which can be used to
automatically create Ensembl (and related) marts.
I do not know your database structure, but perhaps it would work for
you with some minor modifications as well. The major downside of using
Hi,
On 8 September 2010 11:51, a.has...@har.mrc.ac.uk wrote:
File = Naive
File = import
File = update all
File = export
Do you reckon that MartScript will help us?
'Naive' is not supported as such, but you could have a look at the
Java code and implement it yourself. It is fairly
Hi,
Just out of interest - is your data changing that rapidly between releases that
you need to reconfigure/rebuild the MartEditor XMLs each build?
We automatically rebuild our biomarts nightly, all we do is just re-run the
SQL generated by MartBuilder (incorporating your new data) and
Hiya Darren
It's not really the data build that's the problem it's when we use the
actual data in the build to auto-populate a drop down in the filters
section of the biomart. When we build the next one the only way we've
found of resetting those filter dropdowns is to recreate them by hand
Hi Hassan,
There has been a number of similar requests in the past. We are planning to
properly expose the update API in the 0.8.
a
On 08/09/10 6:51 AM, a.has...@har.mrc.ac.uk a.has...@har.mrc.ac.uk wrote:
Hi,
Everytime we have a new data from medical clinics, we do the following
steps
