Re: [Matplotlib-users] netcdf4-python build

2012-09-21 Thread Michael Rawlins
> > From: Damon McDougall >To: Michael Rawlins >Cc: "matplotlib-users@lists.sourceforge.net" > >Sent: Friday, September 21, 2012 2:50 PM >Subject: Re: [Matplotlib-users] netcdf4-python build > > > > >From wha

Re: [Matplotlib-users] netcdf4-python build

2012-09-21 Thread Damon McDougall
On Friday, September 21, 2012, Michael Rawlins wrote: > > After the build, I determined that 'install' was also needed. > > > python setup.py install > > completed with no errors. OK, finally built and installed. But now my > matplotlib script gives this error: > > Traceback (most recent call las

Re: [Matplotlib-users] netcdf4-python build

2012-09-21 Thread Michael Rawlins
After the build, I determined that 'install' was also needed. > python setup.py install completed with no errors.  OK, finally built and installed. But now my matplotlib script gives this error: Traceback (most recent call last):   File "map_PrcpBias_Northeast.py", line 21, in     from netCDF

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Michael Rawlins
> > From: Jeff Whitaker >To: Michael Rawlins >Cc: "matplotlib-users@lists.sourceforge.net" > >Sent: Wednesday, September 19, 2012 5:57 PM >Subject: Re: [Matplotlib-users] netcdf4-python build > > >On 9/19/12 3:29 PM

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Jeff Whitaker
On 9/19/12 3:29 PM, Michael Rawlins wrote: *From:* Jeff Whitaker *To:* Michael Rawlins *Sent:* Wednesday, September 19, 2012 4:57 PM *Subject:* Re: [Matplotlib-users] netcdf4-python build On 9

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Michael Rawlins
> > From: Jeff Whitaker >To: Michael Rawlins >Sent: Wednesday, September 19, 2012 4:57 PM >Subject: Re: [Matplotlib-users] netcdf4-python build > > >On 9/19/12 2:43 PM, Michael Rawlins wrote: > > >> >> >&g

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Michael Rawlins
From: Johann Rohwer To: matplotlib-users@lists.sourceforge.net Sent: Wednesday, September 19, 2012 3:22 PM Subject: Re: [Matplotlib-users] netcdf4-python build On 19/09/2012 21:14, Michael Rawlins wrote: > Just installed h5utils from package mana

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Johann Rohwer
On 19/09/2012 21:14, Michael Rawlins wrote: > Just installed h5utils from package manager. Getting same errors. In > package manager I'm searching on hdf5. If there's a package there I'm > missing, then it certainly is not obvious. Try libhdf5-serial libhdf5-serial-dev Johann

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Michael Rawlins
From: Jeff Whitaker To: Michael Rawlins ; Matplotlib Users Sent: Wednesday, September 19, 2012 2:35 PM Subject: Re: [Matplotlib-users] netcdf4-python build On 9/19/12 11:30 AM, Michael Rawlins wrote: > >Ubuntu 12.04 > > >hdf5-tools

Re: [Matplotlib-users] netcdf4-python build

2012-09-19 Thread Jeff Whitaker
On 9/19/12 11:30 AM, Michael Rawlins wrote: Ubuntu 12.04 hdf5-tools installed from package manager netcdf-bin and python-netcdf installed from package manager I downloaded netCDF4-1.0fix1.tar.gz

[Matplotlib-users] netcdf4-python build

2012-09-19 Thread Michael Rawlins
Ubuntu 12.04 hdf5-tools installed from package manager netcdf-bin and python-netcdf installed from package manager I downloaded netCDF4-1.0fix1.tar.gz from http://code.google.com/p/netcdf4-python/downloads/list > python setup.py build /usr/bin/ld: cannot find -lhdf5_hl /usr/bin/ld: cannot

Re: [Matplotlib-users] netcdf4-python

2012-05-04 Thread Arnaldo Russo
Hi John, Have you tried pupynere module? http://pypi.python.org/pypi/pupynere/ https://bitbucket.org/robertodealmeida/pupynere/ [ ] --- *Arnaldo D'Amaral Pereira Granja Russo* Lab. de Estudos dos Oceanos e Clima Instituto de Oceanografia - FURG 2012/5/4 John > Hello, > > I'm working with t

[Matplotlib-users] netcdf4-python

2012-05-04 Thread John
Hello, I'm working with the latest netcdf4-python (svn updated recently). It has been built with the Netcdf 4.1.1 and HDF 4.2.5 and HDF5 1.8.5 patch libraries. The installation is on Ubuntu 64bit 10.04 LTS. I get some very strange behavior when trying to read a file, which actually causes Ipython

Re: [Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-31 Thread Jeff Whitaker
On 10/31/10 5:44 AM, John wrote: > Jeff, > > I just built netcdf with the following script: > > #!/bin/bash > > ./configure --enable-netcdf-4 --enable-hdf4 --enable-hdf4-file-tests > --enable-pnetcdf --enable-cxx-4 --with-hdf5=/flex_wrk/lib64 > --enable-shared --prefix=/flex_wrk/lib64 > make > make

Re: [Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-31 Thread John
Jeff, I just built netcdf with the following script: #!/bin/bash ./configure --enable-netcdf-4 --enable-hdf4 --enable-hdf4-file-tests --enable-pnetcdf --enable-cxx-4 --with-hdf5=/flex_wrk/lib64 --enable-shared --prefix=/flex_wrk/lib64 make make install Everything seemed to work fine. I then r

Re: [Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-30 Thread Jeff Whitaker
On 10/30/10 5:05 PM, John wrote: > Thank you. I didn't think they used it, I just wanted to know if it > was safe to do what you suggested to try. It does seem to work. > > Another question, can netcd4-python READ HDF files? Or is it just that > it creates files that are readable? If it's the latte

Re: [Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-30 Thread John
Thank you. I didn't think they used it, I just wanted to know if it was safe to do what you suggested to try. It does seem to work. Another question, can netcd4-python READ HDF files? Or is it just that it creates files that are readable? If it's the latter, does anyone have a suggestion for a pyt

Re: [Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-30 Thread Jeff Whitaker
On 10/30/10 3:41 AM, John wrote: > I've searched through the netcdf4-python trunk, but I find no > reference of NetCDFFile as in how the basemap or Scientific.IO.NetCDF > modules use it. > > For compatibility with my old scripts, is it safe to simply: > > from netCDF4 import Dataset as NetCDFFile

[Matplotlib-users] netcdf4-python usage, NetCDFFile

2010-10-30 Thread John
I've searched through the netcdf4-python trunk, but I find no reference of NetCDFFile as in how the basemap or Scientific.IO.NetCDF modules use it. For compatibility with my old scripts, is it safe to simply: from netCDF4 import Dataset as NetCDFFile ?? Thanks, john ---