Hello,
Is it possible to use PyPy with:
* BioPython
* Pysam
* Matplotlib
* etc
If not than it might be good idea to get a support for it with help of
Google Summer of Code, because PyPy getting faster and faster.
Cheers,
Le 29 févr. 2012 à 23:29, questions anon a écrit :
I have a txt file (with an associated prj file) containing gridded weather
data.
Firstly how can I open this file and convert it to a numpy array?
You should have a look on ATpy package : http://atpy.github.com/
Cheers
I'll be attending the pydata hack night in Santa Clara tomorrow night.
We'll be hacking on matplotlib, ipython, pandas, numpy and more. If you
are interested in stopping by, there is space for 200, many more than the
number of attendees at pydata. The event info is here:
Hello --
When I run the following code (heavily adapted from the matplotlib examples):
...
SCHistogram = Figure(figsize=(6,6), dpi=300, facecolor='w') # 6 inches across
(X-axis) by 4 inches tall (Y-axis)
ax = SCHistogram.add_subplot(111)
canvas = FigureCanvas(SCHistogram)
AxisTitleFontProps =
Hi
I am struggling with making graph transparent. Basically, i have wxpython
app with graph located on panel. The panel has bitmap background so i
wanted to get rid of white background of chart in order to make whole thing
nice looking.
However, i can't solve it. I was trying setting with
On Thu, Mar 1, 2012 at 8:14 AM, Mic micta...@gmail.com wrote:
Hello,
Is it possible to use PyPy with:
* BioPython
* Pysam
* Matplotlib
* etc
If not than it might be good idea to get a support for it with help of
Google Summer of Code, because PyPy getting faster and faster.
Most of
Hello,
I'm trying to run a rudimentary animation code (http://pastebin.com/ZNRhDmPR).
When I don't explicitly give a name to the FuncAnimation object, the code
doesn't work. I mean, just dropping in:
anim.FuncAnimation(fig, update_figure, np.arange(0, 2*np.pi, 0.1), interval=50)
instead of,
Hi all,
I'm currently using the hist plot from matlibplot. Here I have the following
question: is there an easy way to set the bin content of a specified bin?
For example, I would like to call set_bin_content(bin_index=1, value=1)
once instead of filling in 1 times the same value.
Thank
On Feb 29, 2012, at 20:00, Bernhard Heijstek bernhard.heijs...@yahoo.com
wrote:
Hello,
I'm trying to run a rudimentary animation code
(http://pastebin.com/ZNRhDmPR). When I don't explicitly give a name to the
FuncAnimation object, the code doesn't work. I mean, just dropping in:
Hi all,
Is it possible to set the size of only some tick labels? I have text
tick labels (residue names). I'd like to reduce the font size of just
two of the labels to make them fit better, but keep the size of the
remaining labels the same.
And in a similar vein, is it possible to change the
Hi,
I'm currently using the hist plot from matlibplot. Here I have the
following
question: is there an easy way to set the bin content of a
specified bin?
For example, I would like to call set_bin_content(bin_index=1,
value=1)
once instead of filling in 1 times the same
On Thu, Mar 1, 2012 at 11:33 AM, Pawel pawe...@gmail.com wrote:
Hi all,
Is it possible to set the size of only some tick labels? I have text
tick labels (residue names). I'd like to reduce the font size of just
two of the labels to make them fit better, but keep the size of the
remaining
On Wed, Feb 29, 2012 at 5:47 PM, C M cmpyt...@gmail.com wrote:
I'd like to use, in one case, small loaded images (pngs) as markers on an
interactive matplotlib plot (using the OO approach). I'd potentially like
to be able to point-pick these markers, too, as well as have them update
Yeah, there are better ways to do that, somewhat. The problem with the
proposed solution is that it relies on non-public APIs, which are can be
subject to change without deprecation. Instead, I would have created the
figimage object with a particular transform object that would have placed
On Thu, Mar 1, 2012 at 10:59 AM, Jean-Baptiste Marquette marqu...@iap.frwrote:
Dear Python gurus,
I have written the attached script to plot data from SAMP interaction with
TOPCAT (http://www.star.bris.ac.uk/~mbt/topcat/).
I select a row on a given table (VOtable format) in TOPCAT, got the
On Wed, Feb 29, 2012 at 4:02 PM, Federico Ariza ariza.feder...@gmail.comwrote:
Dear all
I am a long time matplotlib user (under linux) but new to the list
(second post).
On of the things that bothers me the most is the inability of the standard
backend to change simple things (line color,
On Thu, Mar 1, 2012 at 1:11 PM, C M cmpyt...@gmail.com wrote:
Yeah, there are better ways to do that, somewhat. The problem with the
proposed solution is that it relies on non-public APIs, which are can be
subject to change without deprecation. Instead, I would have created the
figimage
Thanks Ben. Your solution for setting different fontsizes worked like a
charm!
For the other question, what I meant by padding was the distance of the
tick label from the axis. This is what I set with the following command:
matplotplib.pyplot.rc(('xtick.major','ytick.major'), pad=10)
so
On Thu, Mar 1, 2012 at 3:03 PM, Pawel pawe...@gmail.com wrote:
**
Thanks Ben. Your solution for setting different fontsizes worked like a
charm!
Glad it worked.
For the other question, what I meant by padding was the distance of the
tick label from the axis. This is what I set with the
Got it. Thanks again.
Pawel
On 03/01/2012 04:11 PM, Benjamin Root wrote:
On Thu, Mar 1, 2012 at 3:03 PM, Pawel pawe...@gmail.com
mailto:pawe...@gmail.com wrote:
Thanks Ben. Your solution for setting different fontsizes worked
like a charm!
Glad it worked.
For the other
On 1 March 2012 21:37, Benjamin Root wrote:
On Wed, Feb 29, 2012 at 4:02 PM, Federico Ariza ariza.feder...@gmail.com
wrote:
Dear all
I am a long time matplotlib user (under linux) but new to the list
(second post).
On of the things that bothers me the most is the inability of the
In article rowen-a1b6dd.12441428022...@news.gmane.org,
Russell E. Owen ro...@uw.edu wrote:
In article
CACM7dVw_Lde1QDS4vRvi-zTit8gqFYgYuyRLakOqBy0AVii7oA-JsoAwUIsXosN+BqQ9rBEUg@pu
blic.gmane.org,
William Jennings willim...@gmail.com
wrote:
Hello mat plot lib users!
I feel quite
Andrea Gavana :
Anyway, if I am not completely off-track, this is something I had been
looking for as well in matplotlib a while back (3, 4 years ago), but
at that time I was told it would have been complicated to implement it
for all the live backend (I can't recall the exact reason).
I
Federico,
You were so close! Try this:
fig = plt.figure()
ax = fig.add_subplot(111)
ax.plot(range(100), range(100))
#If comment the following line everything is fine
ax.set_xscale('log')
xaxis = ax.get_xaxis()
xaxis.grid(False, which='minor')
xaxis.grid(False, which='major')
plt.show()
Hope
On Thursday, March 1, 2012, Jerzy Karczmarczuk
jerzy.karczmarc...@unicaen.fr wrote:
Andrea Gavana :
Anyway, if I am not completely off-track, this is something I had been
looking for as well in matplotlib a while back (3, 4 years ago), but
at that time I was told it would have been
Would be greate if it would be possible to record talks and slides and make
them public for whome are not leaving near by.
Thank you in advance.
On Fri, Mar 2, 2012 at 12:06 AM, John Hunter jdh2...@gmail.com wrote:
I'll be attending the pydata hack night in Santa Clara tomorrow night.
We'll
On Thu, Mar 1, 2012 at 4:16 PM, Mic micta...@gmail.com wrote:
Would be greate if it would be possible to record talks and slides and make
them public for whome are not leaving near by.
The hack night will be 'open space' so not videotaped, but the main
workshop will be, thanks to the awesome
python, numpy through enthought -
Python 2.7.2 |EPD 7.1-1 (32-bit)| (default, Jul 3 2011, 15:13:59) [MSC
v.1500 32 bit (Intel)] on win32
imports at the top of the script:
import numpy as N
import matplotlib.pyplot as plt
from numpy import ma as MA
from mpl_toolkits.basemap import Basemap
import
+1
On Fri, Mar 2, 2012 at 10:46 AM, Fernando Perez fperez@gmail.comwrote:
On Thu, Mar 1, 2012 at 4:16 PM, Mic micta...@gmail.com wrote:
Would be greate if it would be possible to record talks and slides and
make
them public for whome are not leaving near by.
The hack night will be
Dear Andrea, All
On 1 March 2012 22:31, Andrea Gavana andrea.gav...@gmail.com wrote:
I thought the OP's original question was something like the Matlab
plot editor (or whatever is its name), which allows you to edit line
colours, styles, gridlines styles, this kind of stuff on a live plot
David,
The loop is you have is unnecessary. You can plot the markers and the
lines at the same time like so:
from mpl_toolkits.basemap import Basemap
import matplotlib.pyplot as plt
import matplotlib.lines as lines
import numpy as np
m =
Whoops, make that:
from mpl_toolkits.basemap import Basemap
import matplotlib.pyplot as plt
import matplotlib.lines as lines
import numpy as np
m = Basemap(llcrnrlon=-11.5,llcrnrlat=51.0,urcrnrlon=-4.5,urcrnrlat=56.0,
resolution='i',projection='cass',lon_0=-4.36,lat_0=54.7)
lats =
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