[Matplotlib-users] dvipng/miktex 2.5 usetex problem

2006-10-27 Thread Ryan Krauss
I am trying to use latex with matplolib on Windows XP with MikTex 2.5
and dvipng 1.8.

I am getting this warning:
dvipng warning: font cmsy10 at 512 dpi not found, characters will be left blank

when I do this:

t=arange(0,1,0.01)
y=sin(2*pi*t)
plot(t,y)

and this
ylabel('$y(t)$')

leads to
dvipng warning: font cmr17 at 356 dpi not found, characters will be left blank

with no ylabel.

I am also getting a lot of other output (see below).

How do I fix this?

Thanks,

Ryan

==
Trying to make PK font cmmi12 at 512 DPI...
Creating cmmi12.pk...
Running mf...
This is METAFONT, Version 2.71828 (MiKTeX 2.5)

(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\cmmi12.mf
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\cmbase.mf)
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\mathit.mf
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romanu.mf [65] [66]
[67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81]
[82] [83] [84] [85] [86] [87] [88] [89] [90])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\itall.mf [97] [98] [99]
[100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111]
[112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\greeku.mf [0] [1] [2]
[3] [4] [5] [6] [7] [8] [9] [10])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\greekl.mf [11] [12]
[13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27]
[28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\italms.mf [64] [96]
[123] [124] [125] [126] [127])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\olddig.mf [48] [49]
[50] [51] [52] [53] [54] [55] [56] [57])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romms.mf [40] [41] [42]
[43] [44] [45] [46] [47] [58] [59] [60] [61] [62] [63] [91] [92] [93] [94]
[95]) ) )
Font metrics written on cmmi12.tfm.
Output written on cmmi12.512gf (128 characters, 25960 bytes).
Transcript written on cmmi12.log.
METAFONT failed for some reason
ignoring 0 strange path(s)
Running gftopk...
This is GFtoPK, Version 2.3 (MiKTeX 2.5)
'METAFONT output 2006.10.27:2322'
25960 bytes packed to 14164 bytes.
dvipng warning: font cmmi12 at 512 dpi not found, characters will be left blan
Trying to make PK font cmr17 at 356 DPI...
Creating cmr17.pk...
Running mf...
This is METAFONT, Version 2.71828 (MiKTeX 2.5)

(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\cmr17.mf
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\cmbase.mf)
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\roman.mf
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romanu.mf [65] [66]
[67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81]
[82] [83] [84] [85] [86] [87] [88] [89] [90])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romanl.mf [97] [98]
[99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111]
[112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\greeku.mf [0] [1] [2]
[3] [4] [5] [6] [7] [8] [9] [10])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romand.mf [48] [49]
[50] [51] [52] [53] [54] [55] [56] [57])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romanp.mf [36] [38]
[63] [62]) (C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romspl.mf
[16] [17] [25] [26] [27] [28])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romspu.mf [29] [30]
[31]) (C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\punct.mf [33]
[60] [35] [37] [39] [40] [41] [42] [43] [44] [46] [47] [58] [59] [61] [64]
[91] [93] [96]) (C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\accent.mf
[18] [19] [20] [21] [22] [23] [24] [32] [94] [95] [125] [126] [127])
(C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\romlig.mf [11] [12]
[13] [14] [15]) (C:\Program Files\MiKTeX 2.5\fonts\source\public\cm\comlig.mf
[34] [45] [92] [123] [124]) ) )
Font metrics written on cmr17.tfm.
Output written on cmr17.356gf (128 characters, 24612 bytes).
Transcript written on cmr17.log.
METAFONT failed for some reason
ignoring 0 strange path(s)
Running gftopk...
This is GFtoPK, Version 2.3 (MiKTeX 2.5)
'METAFONT output 2006.10.27:2322'
24612 bytes packed to 11084 bytes.
dvipng warning: font cmr17 at 356 dpi not found, characters will be left blank

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Re: [Matplotlib-users] Problem building matplotlib

2006-10-27 Thread Eric Firing
Victor Danilchenko wrote:
>   Hi all,
> 
>   I am trying to build Matplotlib 0.87.7 on an RHEL 4.4-derived system, 
> with Python 2.3.4. I am running into a weird problem. When I do "python 
> setup.py build", I get the following error:
> 
> gcc: src/_gtkagg.cpp
> In file included from /usr/include/python2.3/Python.h:8,
>   from /usr/include/pygtk-2.0/pygobject.h:5,
>   from src/_gtkagg.cpp:11:
> /usr/include/python2.3/pyconfig.h:850:1: warning: "_POSIX_C_SOURCE" 
> redefined
> In file included from /usr/include/string.h:26,
>   from 
> /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../include/c++/3.4.6/cstring:51,
>   from src/_gtkagg.cpp:2:
> /usr/include/features.h:150:1: warning: this is the location of the 
> previous definition
> In file included from src/_gtkagg.cpp:11:
> /usr/include/pygtk-2.0/pygobject.h:140: error: expected `,' or `...' 
> before "typename"
> /usr/include/pygtk-2.0/pygobject.h:147: error: expected `,' or `...' 
> before "typename"
[...]

The error is not in matplotlib, it is in a pygtk header file, which is 
presumably coming from a Redhat package.  I don't know why it is 
happening or what the best solution is, though.  It looks like the 
pygobject.h that I have has "typename_", not "typename", so I am 
thinking maybe this is a pygtk bug, since fixed, in which "typename" is 
in conflict with something.  You might try editing your copy of 
pygobject.h, adding the trailing underscore to "typename" on both lines 
where it occurs.  It can't hurt; these are just dummy variable names.

Eric

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Re: [Matplotlib-users] Error with bar charts

2006-10-27 Thread Suresh Pillai
Thanks for the support.

I uninstalled numarray, and then compiled/installed most recent numpy and 
matplotlib from the tarballs.

And I am happy to announce I can now perform the mundane task of plotting 
barcharts and histograms. :)

Thanks again everyone,
Suresh

On Thu, 26 Oct 2006, Eric Firing wrote:

> Suresh,
>
> This is baffling, and particularly annoying for someone just starting out 
> with mpl.  I don't think there is any problem with the barchart code--the 
> demo works for me with numarray--and I don't see anything obvious in the 
> traceback. Are your matplotlib and numarray both from Mandriva packages?
>
> I would be inclined to download numpy and matplotlib as nice, fresh tarballs, 
> uninstall any previous versions (including numarray), build and install 
> numpy, and then do the same for matplotlib.  If you have not done this before 
> you will probably trip over some missing -devel packages (furnishing header 
> files for python, gtk, etc), but once all that is straightened out it should 
> go smoothly.
>
> Eric

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[Matplotlib-users] Problem building matplotlib

2006-10-27 Thread Victor Danilchenko
Hi all,

I am trying to build Matplotlib 0.87.7 on an RHEL 4.4-derived system, 
with Python 2.3.4. I am running into a weird problem. When I do "python 
setup.py build", I get the following error:

gcc: src/_gtkagg.cpp
In file included from /usr/include/python2.3/Python.h:8,
  from /usr/include/pygtk-2.0/pygobject.h:5,
  from src/_gtkagg.cpp:11:
/usr/include/python2.3/pyconfig.h:850:1: warning: "_POSIX_C_SOURCE" 
redefined
In file included from /usr/include/string.h:26,
  from 
/usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../include/c++/3.4.6/cstring:51,
  from src/_gtkagg.cpp:2:
/usr/include/features.h:150:1: warning: this is the location of the 
previous definition
In file included from src/_gtkagg.cpp:11:
/usr/include/pygtk-2.0/pygobject.h:140: error: expected `,' or `...' 
before "typename"
/usr/include/pygtk-2.0/pygobject.h:147: error: expected `,' or `...' 
before "typename"
In file included from /usr/include/python2.3/Python.h:8,
  from /usr/include/pygtk-2.0/pygobject.h:5,
  from src/_gtkagg.cpp:11:
/usr/include/python2.3/pyconfig.h:850:1: warning: "_POSIX_C_SOURCE" 
redefined
In file included from /usr/include/string.h:26,
  from 
/usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../include/c++/3.4.6/cstring:51,
  from src/_gtkagg.cpp:2:
/usr/include/features.h:150:1: warning: this is the location of the 
previous definition
In file included from src/_gtkagg.cpp:11:
/usr/include/pygtk-2.0/pygobject.h:140: error: expected `,' or `...' 
before "typename"
/usr/include/pygtk-2.0/pygobject.h:147: error: expected `,' or `...' 
before "typename"



So I did a google search, and found someone recommending that "#include 
" be prepended to the offending file. I have prepended it to 
src/_gtkagg.cpp, did a clean, and run the build again. The error 
changed, and the "_POSIX_C_SOURCE" problem went away, but the build is 
still failing, at that same file:

gcc: src/_gtkagg.cpp
In file included from src/_gtkagg.cpp:11:
/usr/include/pygtk-2.0/pygobject.h:140: error: expected `,' or `...' 
before "typename"
/usr/include/pygtk-2.0/pygobject.h:147: error: expected `,' or `...' 
before "typename"
In file included from src/_gtkagg.cpp:11:
/usr/include/pygtk-2.0/pygobject.h:140: error: expected `,' or `...' 
before "typename"
/usr/include/pygtk-2.0/pygobject.h:147: error: expected `,' or `...' 
before "typename"



Does anyone have an idea of what is going wrong here? I could really 
use some help, as I am totally stumped.

Many thanks in advance.


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Re: [Matplotlib-users] Error with bar charts

2006-10-27 Thread Suresh Pillai
Yes, both are mandriva packages:

python-matplotlib-0.87.4-2mdv2007.0
python-numarray-1.5.2-1mdv2007.0

Given there isnt a python-numpy package for x64-64 right now (there is a 
devel one, so not sure why no main package), I will go ahead and try to 
build from scratch.

Thanks,
Suresh



On Thu, 26 Oct 2006, Eric Firing wrote:

> Suresh,
>
> This is baffling, and particularly annoying for someone just starting out 
> with mpl.  I don't think there is any problem with the barchart code--the 
> demo works for me with numarray--and I don't see anything obvious in the 
> traceback. Are your matplotlib and numarray both from Mandriva packages?
>
> I would be inclined to download numpy and matplotlib as nice, fresh tarballs, 
> uninstall any previous versions (including numarray), build and install 
> numpy, and then do the same for matplotlib.  If you have not done this before 
> you will probably trip over some missing -devel packages (furnishing header 
> files for python, gtk, etc), but once all that is straightened out it should 
> go smoothly.
>
> Eric
>

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Re: [Matplotlib-users] Unable to compile on FC6

2006-10-27 Thread Robert Elsner
On Fri, 2006-10-27 at 11:58 +0200, Trond Danielsen wrote:
> 2006/10/27, Robert Elsner <[EMAIL PROTECTED]>:
> > Hello Everybody,
> >
> > I use the usual scipy + numpy + matplotlib combination for my daily
> > work. Unfortunately after switching to Fedora Core 6 (from FC5) I am
> > unable to compile matplotlib 0.87.6 on my system.
> >
> 
> I am sure you allready know this, but matplotlib 0.87.6 is available
> from fedora extra.
> 
> Best regards,
> Trond
> 

Yes I noticed that 0.87.6 is available from fedora-extras for FC6. But
unfortunately this one is unable to work with numpy 1.0 final. But
thanks nonetheless ;).
And as Chuck pointed out - he managed to compile from svn. I tried the
new 0.87.7 and that one finally compiled.
I ran some quick tests and it seems to work well.
So thanks for your help @Chuck,Trond.

Robert


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Re: [Matplotlib-users] Unable to compile on FC6

2006-10-27 Thread Trond Danielsen
2006/10/27, Robert Elsner <[EMAIL PROTECTED]>:
> Hello Everybody,
>
> I use the usual scipy + numpy + matplotlib combination for my daily
> work. Unfortunately after switching to Fedora Core 6 (from FC5) I am
> unable to compile matplotlib 0.87.6 on my system.
>

I am sure you allready know this, but matplotlib 0.87.6 is available
from fedora extra.

Best regards,
Trond

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Re: [Matplotlib-users] Matplotlib wraps the graph

2006-10-27 Thread Trond Danielsen
2006/10/26, Trond Danielsen <[EMAIL PROTECTED]>:
>
> I will have to check this, but I do not think that is the problem. The
> data is used in another algorithm which locates the correlation
> maximum between two sliding windows (to detect the start of a data
> msg), and the algorithm returns the correct result, only the plot is
> wrong.

I tried this again on Fedora Core 6, and the problem seems to be solved.

-- 
Trond Danielsen

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