[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-02-04 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16351873#comment-16351873
 ] 

James Joseph Masanz commented on CTAKES-492:


I'm not sure that the link I posted is indeed the root of the problem you are 
seeing, but the symptoms looked the same or similar. Can you post a description 
of the problem you are seeing to one of the mailing lists and maybe someone in 
the cTAKES community has already seen it or is using Java 9 and not seeing it.

FYI, you should not install java.exe under CTAKES_HOME.  Whenever you install 
Java, open a new command window and use the  following command to see which 
version is in effect:

java   -version

 

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-02-01 Thread Queenie Cheong (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16348642#comment-16348642
 ] 

Queenie Cheong commented on CTAKES-492:
---

Hi James,

 

Thanks for your suggestion.

If that is the case, I would like to uninstall Java 9 and install Java 8.

Do you know if the Java.exe needs to be inside a specific folder in CTAKES_HOME?

Thank you!

Queenie

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread ASF subversion and git services (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341573#comment-16341573
 ] 

ASF subversion and git services commented on CTAKES-492:


Commit 1822347 from james-mas...@apache.org in branch 'ctakes/trunk'
[ https://svn.apache.org/r1822347 ]

CTAKES-492 handle space(s) within the CTAKES_HOME path and first argument

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread ASF subversion and git services (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341545#comment-16341545
 ] 

ASF subversion and git services commented on CTAKES-492:


Commit 1822346 from james-mas...@apache.org in branch 'ctakes/trunk'
[ https://svn.apache.org/r1822346 ]

CTAKES-492 handle space(s) within the CTAKES_HOME path

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread ASF subversion and git services (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341541#comment-16341541
 ] 

ASF subversion and git services commented on CTAKES-492:


Commit 1822344 from james-mas...@apache.org in branch 'ctakes/trunk'
[ https://svn.apache.org/r1822344 ]

CTAKES-492 handle space(s) within the CTAKES_HOME path

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread ASF subversion and git services (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341496#comment-16341496
 ] 

ASF subversion and git services commented on CTAKES-492:


Commit 1822340 from james-mas...@apache.org in branch 'ctakes/trunk'
[ https://svn.apache.org/r1822340 ]

CTAKES-492 handle space(s) within the CTAKES_HOME path

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>  Components: ctakes-clinical-pipeline, ctakes-distribution
>Affects Versions: 4.0.0
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Fix For: 4.0.1
>
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341470#comment-16341470
 ] 

James Joseph Masanz commented on CTAKES-492:


Going back to the original problem, the runctakesCVD.bat file is missing quotes 
around the value for the -Dlog4j.configuration argument

It should be this:

-Dlog4j.configuration="file:\%CTAKES_HOME%\config\log4j.xml"

I'll use this issue to track the fixes for that and other bat files, if there 
are any, that have issues if there is a space in the path name for CTAKES_HOME

 

 

 

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-26 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16341436#comment-16341436
 ] 

James Joseph Masanz commented on CTAKES-492:


I haven't seen that before but if you are using Java 9, it looks like it might 
be related to this(?):

[https://community.oracle.com/thread/4011800]

I'm using Java 8 and I don't see this latest error you are seeing even if I 
have a space in the path, so it's not another blank-related issue.

I suggest you post to the user@ mailing list and see if anyone else has seen 
the problem. Information about the mailing lists is at:

https://ctakes.apache.org/mailing-lists.html

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread Queenie Cheong (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16340183#comment-16340183
 ] 

Queenie Cheong commented on CTAKES-492:
---

Thanks James.

I ran the command line and received the same error as in CVD. Please see 
attached log file.

[^20180125.txt]

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: 20180125.txt, image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16340153#comment-16340153
 ] 

James Joseph Masanz commented on CTAKES-492:


I can't see all of the details to the right in the screen shot with the 
timestamp that includes the word SEVERE.


You might want to skip down to the "Next Steps: section of the user guide, 
where it talks about running the Default Clinical Pipeline from the command line

"To run cTAKES from a command line, see[ Default Clinical 
Pipeline|https://cwiki.apache.org/confluence/display/CTAKES/Default+Clinical+Pipeline].";

and see if that is easier.

 

If you do want to continue with CVD, could you do the following:

After running and receiving the error, within CVD, use the Tools->View Log File 
menu option, and upload the log file as an attachment to this issue.

 

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread Queenie Cheong (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16340139#comment-16340139
 ] 

Queenie Cheong commented on CTAKES-492:
---

Thanks, James. 

I corrected the code, but the issue (please see below for the cause) seems to 
persist.

Perhaps the problem was not the umls username and password...

Interestingly, the problem does not happen when I load the 
AggregatePlainTextProcessor. It only happens for the 
AggregatePlainTextUMLSFASTProcessor.

Any thoughts on this?

!image-2018-01-25-16-43-19-264.png!

!image-2018-01-25-16-43-59-940.png!

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, image-2018-01-25-16-43-19-264.png, 
> image-2018-01-25-16-43-59-940.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16340094#comment-16340094
 ] 

James Joseph Masanz commented on CTAKES-492:


rather than adding a new line with the java command and the umls parameters, it 
was meant for you to insert the umls parameters between the "java" and the -cp 
parameter on the existing line

So you will want to delete the  line that you inserted that contains

java  -Dctakes.umlsuser=

On the line above that, make the java command look something like the 
following, but don't delete what appears after desc, and make sure to replace 
Your_UMLS_Password with your actual UMLS password

java -Dctakes.umlsuser=qcheong -Dctakes.umlspw="Your_UMLS_Password"  -cp 
"%CTAKES_HOME%\desc

 

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread Queenie Cheong (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16339648#comment-16339648
 ] 

Queenie Cheong commented on CTAKES-492:
---

James, thanks for your guidance here.

I am able to launch the CVD now! Very excited!

 It seems that the AE cannot be loaded. Maybe because my umls username and 
password are not set right in the file? Is the highlighted where it is supposed 
to go? Do I need to keep the < > sign around the username and password?

 

Again, really appreciate your help!

!image-2018-01-25-14-05-16-538.png!

!image-2018-01-25-14-03-29-934.png!

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, image-2018-01-25-14-03-29-934.png, 
> image-2018-01-25-14-05-16-538.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16339505#comment-16339505
 ] 

James Joseph Masanz commented on CTAKES-492:


It looks like the space in your directory name, combined with the lack of 
quotation marks around the path that is the argument of the 
-Dlog4j.configuration parameter, is causing the first part of the path to be 
interpreted as the path and the second part to be (wrongly) interpreted as the 
class name.

You could add quotation marks or use a path that doesn't have a space in it.

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-25 Thread Queenie Cheong (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16339392#comment-16339392
 ] 

Queenie Cheong commented on CTAKES-492:
---

Thanks for your recommendation, James! It helped to set the environment 
variable correctly.

However, after it runs a couple of lines in runctakesCVD.bat, it seems that 
there is an error in loading the main class. Any thoughts on the reason? 

!screenshot-1.png!

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Assignee: James Joseph Masanz
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png, screenshot-1.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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[jira] [Commented] (CTAKES-492) New cTAKES user question

2018-01-24 Thread James Joseph Masanz (JIRA)

[ 
https://issues.apache.org/jira/browse/CTAKES-492?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16338140#comment-16338140
 ] 

James Joseph Masanz commented on CTAKES-492:


I think the easiest at this point it to unset the CTAKES_HOME environment 
variable and then let the .bat file set it for you.

Since you are on Windows, these 3 commands should work for you:

CD  "C:\Users\Queenie Cheong\Desktop\cTAKES\apache cTAKES\CTAKES_HOME"

SET  CTAKES_HOME=

bin\runctakesCVD.bat

 

Note that on the SET command, there is nothing after the equals sign. 

The other option is to set the CTAKES_HOME environment variable yourself

SET  CTAKES_HOME="C:\Users\Queenie Cheong\Desktop\cTAKES\apache 
cTAKES\CTAKES_HOME"

 

> New cTAKES user question
> 
>
> Key: CTAKES-492
> URL: https://issues.apache.org/jira/browse/CTAKES-492
> Project: cTAKES
>  Issue Type: Task
>Reporter: Queenie Cheong
>Priority: Major
> Attachments: image-2018-01-23-17-29-49-347.png, 
> image-2018-01-23-17-31-03-571.png
>
>
> Hi experienced cTAKES users/ developers,
> I am a new user to cTAKES, and just downloaded cTAKES 4.0 based on 
> installation guide. I am unable to set the environment variable correctly (I 
> am also not a coder). It seems that the code stopped running at line 44 for 
> me.
>  
> Thanks for anyone who can provide some guidance!
> !image-2018-01-23-17-29-49-347.png!
> !image-2018-01-23-17-31-03-571.png!
>  
>  



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