Re: [OpenBabel-Devel] FASTA File

2016-11-14 Thread Noel O'Boyle
Also, you may have obabel installed on your system, so make sure to use "./obabel" if it's in the current folder, and "which obabel" to determine the path. - Noel On 14 November 2016 at 04:06, Geoffrey Hutchison wrote: >> Doing this had no effect on running "obabel" or "babel" even though I was

Re: [OpenBabel-Devel] FASTA File

2016-11-13 Thread Geoffrey Hutchison
> Doing this had no effect on running "obabel" or "babel" even though I was > using fasta format as the input format (i.e. ./babel -ifa a.fa -opdb a.pdb) > after recompiling. I ask because I want to change the behavior of how fasta > interprets strings (for instance, making it sensitive to case)

[OpenBabel-Devel] FASTA File

2016-11-13 Thread Joshua Barnett
Everyone, I have a question concerning using openbabel to convert a fasta file to another file type. In particular, I want to know which file under the current release (2.4.1) is responsible for doing translation. I thought that the file responsible for this was under openbabel-2.4.1/src/formats/f