pt to read the second argument
> n <- as.character(args[2])
> use it as the data file name
> data <- read.csv(n, header=T, sep=",")
> and repackaged with care.
>
> But I get an error (see attached file) when I try to run it on
> op
"*${n}*"),
> outputFiles += ("results.csv", output)
> )
>
> (I've also modified accordingly the test.R file and repackaged
> care.tgz.bin.)
>
> Does anyone have an idea of how to read different input files on each
> iteration of the model?
>
> Thanks!
in there :)
We provide binaries (using this project
https://github.com/proot-me/proot-static-build) because it's not
straightforward to build but you can build it on your own if you wish.
Cheers
J
> Best regards,
>
> Pierre-Olivier
>
> PS: I tried to summarize an offline discussio
Tél : +33 (0)1 44 38 91 38
> http://b2phi.inserm.fr <http://b2phi.inserm.fr/>
> https://research.pasteur.fr/en/team/pharmacoepidemiology-and-infectious-diseases
> <https://research.pasteur.fr/en/team/pharmacopepidemiology-and-infectious-diseases>
>
> ___
> OpenMOLE-users mailing
(unilim) a écrit :
>> Hey Myriam,
>> Where (pwd Linux command) are you when you want to run OM ?
>>
>> Do you remember, you need to be in something like cd
>> ~/openmole/openmole/bin/openmole/target/assemble
>>
>> E.
>>
>> Le 01/06/201
ception" then "cd ../openmole, sbt assemble", i
> got errors relating to "the bundle activator"
>
> - Gama plugin: error on the "sbt generate task" (cf. attachement)
>
> What should I do?
>
> Best regards,
>
> Myriam
>
>
>
&g
>
>> 25 rue du Docteur Roux
>> 75724 Paris Cedex 15, France
>> Tél : +33 (0)1 44 38 91 38 <+33%201%2044%2038%2091%2038>
>>
>> http://b2phi.inserm.fr
>> https://research.pasteur.fr/en/team/pharmacoepidemiology-
>> and-infectious-diseases
>>
><https://research.pasteur.fr/en/te
;> <http://fedex.iscpif.fr/mailman/listinfo/openmole-users>
>
> ___
> OpenMOLE-users mailing list OpenMOLE-users@iscpif.fr
> <mailto:OpenMOLE-users@iscpif.fr>
> http://fedex.iscpif.fr/mailman/list
-execute successfully once packaged with CARE:
- delete the .pyc from your archive
- check the size of your .py files
You can always manipulate your CARE archive with our (hacky) scripts
https://github.com/proot-me/PRoot/pull/110
Have a nice weekend
J.
--
Jonathan Passerat-Palmbach, PhD
Might have been a bug recently fixed in the next release
I've baked a up to date tarball without the CARE overhead
https://www.doc.ic.ac.uk/~jpassera/openmole.tar.gz
Tell me if that works better for you
Cheers
J.
On 18/01/17 15:02, Jonathan Passerat-Palmbach wrote:
>
> Hi Rob,
>
las N1](https://nylas.com/n1?ref=n1), the extensible, open
>source
>mail client.
>
>
>On janv. 5 2017, at 2:08 pm, Jonathan Passerat-Palmbach palmb...@imperial.ac.uk> wrote:
>
>> Hey Seb,
>
>Not sure we're on the same page, so just in case: we've got two docker
>Research Engineer, BAP E, UMR IDEES
>
>Sent from [Nylas N1](https://nylas.com/n1?ref=n1), the extensible, open
>source
>mail client.
>
>
>On déc. 29 2016, at 1:13 pm, Jonathan Passerat-Palmbach palmb...@imperial.ac.uk> wrote:
>
>> Hey all,
>
>We
lient.core/target/scala-2.11/scalajs-bundler/main"):
>> > error=2, No such file or directory
>> >
>> > Any idea ?
>> >
>>
>
>
>
>--
><http://stackoverflow.com/users/385881/reyman64>
>
>
>---
> http://fedex.iscpif.fr/mailman/listinfo/openmole-users
--
Jonathan Passerat-Palmbach, PhD
Research Associate
Department of Computing
Imperial College London
South Kensington Campus
Huxley Building - room 344
180 Queen's Gate
London SW7 2AZ
smime.p7s
Description: S/MIME Cryptographic Signat
^
>
>
>
>Any idea ?
>
>
>
>\---
>
>Sébastien Rey Coyrehourcq
>
>Research Engineer, BAP E, UMR IDEES
>
>Sent from [Nylas N1](https://nylas.com/n1?ref=n1), the extensible, open
>source
>mail client.
>
>
>
>--
ith us at: https://chat.iscpif.fr/
>>channel/openmole
>>
>> We'd like to thanks the vibrant OpenMOLE community of developers and
>> users. The community is really involved and it is a pleasure to work
>with
>> you all!
>>
>> __
gt;>>>> org.openmole.core.workflow.task.Task$$anonfun$perform$1.apply(Task.scala:59)
>>>>>
>>>>>
>>>>> at
>>>>> org.openmole.core.workflow.task.Task$$anonfun$perform$1.apply(Task.scala:59)
>>>>>
>&g
versité de Limoges, FLSH
>39E rue Camille Guérin 87036 Limoges
>blog : http://elcep.legtux.org
>
>Le 19/07/2016 à 18:36, Jonathan Passerat-Palmbach a écrit :
>> Hi Etienne,
>>
>>
>> On 19/07/16 14:15, Delay Etienne wrote:
>>> Hoho
>>> Nice
;>>
>org.openmole.core.workflow.execution.local.LocalExecutor.run(LocalExecutor.scala:61)
>>>>>>
>>>>>>
>>>>>>
>>>>>> at java.lang.Thread.run(Thread.java:745)
>>>>>> Caused by: org.openmole.core.excepti
ess$1.apply(CARETask.scala:159)
>>>>
>>>>
>>>>
>>>> at
>>>> org.openmole.plugin.task.care.CARETask$$anonfun$process$1.apply(CARETask.scala:93)
>>>>
>>>>
>>>>
>>>> at
>>>> org.op
; web: <http://www.yildizoglu.fr>www.yildizoglu.fr
>>
>>
>> ___
>> OpenMOLE-users mailing list
>> OpenMOLE-users@iscpif.fr
>> http://fedex.iscpif.fr/mailman/listinfo/openmole-users
>
>
>
> _
___
OpenMOLE-users mailing list
OpenMOLE-users@iscpif.fr
http://fedex.iscpif.fr/mailman/listinfo/openmole-users
--
Jonathan Passerat-Palmbach, PhD
Research Associate
Department of Computing
Imperial College London
South Kensington Campus
Huxley Building - room 344
180
-users mailing list
OpenMOLE-users@iscpif.fr
http://fedex.iscpif.fr/mailman/listinfo/openmole-users
--
Jonathan Passerat-Palmbach, PhD
Research Associate
Department of Computing
Imperial College London
South Kensigton Campus
Huxley Building - room 344
180 Queen's Gate
London SW7
23 matches
Mail list logo
