Re: [petsc-users] Unable to compile super_dist using an intel compiler

2019-08-27 Thread Smith, Barry F. via petsc-users
CMake likes to specifically check that all include directories passed to it exist. PETSc does not foreach(dir ${TPL_PARMETIS_INCLUDE_DIRS}) if (NOT EXISTS ${dir}) message(FATAL_ERROR "PARMETIS include directory not found: ${dir}") endif() set(CMAKE_C_FLAGS "-I${dir}

Re: [petsc-users] Unable to compile super_dist using an intel compiler

2019-08-27 Thread Smith, Barry F. via petsc-users
ls -ld /apps/local/easybuild/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/intel64/include > On Aug 27, 2019, at 3:18 PM, Fande Kong via petsc-users > wrote: > > Hi All, > > I was trying to compile PETSc with "--download-superlu_dist" using an intel > compiler. I have

Re: [petsc-users] Unable to compile super_dist using an intel compiler

2019-08-27 Thread Balay, Satish via petsc-users
attached zip file has the same/old configure.log Can you use PETSC_ARCH=arch-test - so that the old build files are not reused, and resend the new configure.log Satish On Tue, 27 Aug 2019, Fande Kong via petsc-users wrote: > No, I hit exactly the same error using your script. > > Thanks, > >

Re: [petsc-users] Unable to compile super_dist using an intel compiler

2019-08-27 Thread Balay, Satish via petsc-users
On Tue, 27 Aug 2019, Fande Kong via petsc-users wrote: > Hi All, > > I was trying to compile PETSc with "--download-superlu_dist" using an intel > compiler. I have explored with different options, but did not get PETSc > built successfully so far. Any help would be appreciated. > > The log file

Re: [petsc-users] DMPlex for cell centred finite volume

2019-08-27 Thread Edoardo alinovi via petsc-users
Sounds good, i will take a look. Thanks! On Tue, 27 Aug 2019, 12:28 Nathan Collier, wrote: > Here is a example of what I think you need: > > > https://github.com/TDycores-Project/toy-problems/blob/master/TracyProblem/Richards.c > > It is written to solve Richard's equation using a simple

Re: [petsc-users] Questions about the physical groups

2019-08-27 Thread Jian Zhang - 3ME via petsc-users
Thank you very much for your reply. As a user, if I define a physical group named "right" in Gmsh, I also would like to access it by using this name in DMPlex. It could be convenient and understandable for the user. I think it would be nice if you guys can add this translation table. Thanks a

[petsc-users] Questions about the physical groups

2019-08-27 Thread Jian Zhang - 3ME via petsc-users
Hi all, I have a mesh file where I defined a physical group named "volume" whose id is 0. For DMPlex, I know that I can use this id (0) to access this physical group. Here I would like to ask that is it possible to use the physical group name "volume" to achieve this in DMPlex. Thank you very

[petsc-users] high order interpolation

2019-08-27 Thread Ruth Schöbel via petsc-users
Hi, I am on the way to write a program in python where I need parallel high order interpolation. I saw there exists “createInterpolation(self, DM dm)”, but this seems to be accurate only for constant functions. Is there a way to get a higher order interpolation matrix? If it does not exist maybe

Re: [petsc-users] DMPlex for cell centred finite volume

2019-08-27 Thread Matthew Knepley via petsc-users
On Tue, Aug 27, 2019 at 4:07 AM Edoardo alinovi via petsc-users < petsc-users@mcs.anl.gov> wrote: > Hello PETSc users and developers, > I hope you are doing well! Today I have a general question about DMplex to > see if it can be usefull to me or not. > > I have my fancy finite volume solver