SBAIJ issue

2009-10-13 Thread Andreas Grassl
Hong Zhang schrieb: Ando, I do not see any error message from attached info below. Even '-log_summary' gives correct display. I guess you sent us the working output (np=2). I have attached 3 files. The one you found with -log_summary printed is indeed the working scenario. The other 2

SBAIJ issue

2009-10-13 Thread Andreas Grassl
Barry Smith schrieb: Perhaps you have done enough memory preallocation for the multiprocessors and it is going very--very slowly with memory allocations? do you mean this line MatMPISBAIJSetPreallocation(A, bs,nz, PETSC_NULL,nz, PETSC_NULL) I set bs to 1 and nz to 77 or do you mean the

SBAIJ issue

2009-10-13 Thread Andreas Grassl
Hong Zhang schrieb: I would suggest you run your code with debugger, e.g., '-start_in_debugger'. When it hangs, type Control-C, and type 'where' to check where it hangs. The debugger output of the ongoing process when given option -ksp_view_binary with mumps_cholesky. It is hanging after

Building Issues on BGL

2009-10-13 Thread Niall Moran
Hi, I am having issues compiling the latest version of PETSc on a Bluegene/ L machine. I am using the IBM compilers version V1R3M3_420_2007-071023. The error I am getting during compile is ./petsc-3.0.0-p8/src/sys/viewer/impls/socket send.c, line 105.12: 1540-0274 (S) The name lookup for

Building Issues on BGL

2009-10-13 Thread Matthew Knepley
before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20091013/129ec621

SBAIJ issue

2009-10-13 Thread Hong Zhang
It seems the code hangs in MatView_MPISBAIJ_ASCIIorDraworSocket (), a not well-tested routine. Can you send us your matrix in petsc binary format? We can test it and find a fix. My understanding is: when given the option -ksp_view_binary on np=4, the code hangs. What happens without the option

Building Issues on BGL

2009-10-13 Thread Satish Balay
You have to remove the defines or rename them to something else in petscconf.h. Just commenting or undefining doesn't work. [this is because our build system does a grep on this file - so its doesn't exactly follow preprocessing directives] Regarding the original issue - I'm not sure why it