Re: qiime REMOVED from testing

2014-08-10 Thread Steven Chamberlain
Hi Andreas, On 10/08/14 17:28, Andreas Tille wrote: > It would be more than welcome to drop libjogl-java but can you send us a > patch to get rid of this dependency. This would be really appreciated. Actually the dependency is qiime -> king -> libjogl-java The attached patch is all that's need

Re: qiime REMOVED from testing

2014-08-10 Thread Andreas Tille
Hi Steven, On Sun, Aug 10, 2014 at 04:24:54PM +0100, Steven Chamberlain wrote: > On 10/08/14 14:33, Sylvestre Ledru wrote: > > I would like to remove jogl v1 for Jessie and it is the last package > > using it. > > I still think qiime's libjogl-java dependency can be dropped; with > openjdk-7 at

Re: qiime REMOVED from testing

2014-08-10 Thread Steven Chamberlain
Hi, On 10/08/14 14:33, Sylvestre Ledru wrote: > I would like to remove jogl v1 for Jessie and it is the last package > using it. I still think qiime's libjogl-java dependency can be dropped; with openjdk-7 at least, graphics rendering seems more than fast enough without it. Regards, -- Steven

Re: qiime REMOVED from testing

2014-08-10 Thread Sylvestre Ledru
On Wed, 22 Jan 2014 13:02:39 +0100 Andreas Tille wrote: > Hi Steven, > > If the libjogl-java dependency is dropped, king should be installable on > > kfreebsd and then so would qiime. And libjogl2-java transition can go > > ahead. > > Most probably this would be the most simple solution. OK. Any p

Re: qiime REMOVED from testing

2014-01-27 Thread Steven Chamberlain
On 22/01/14 10:49, Andreas Tille wrote: > Well, for king we have another problem that it depends from the > deprecated libjogl-java and should be replaced by libjogl2-java. I tried removing libjogl-java, and KiNG still seems to work? I don't know if the graphics are being 'accelerated' or not, b

Re: qiime REMOVED from testing

2014-01-27 Thread Andreas Tille
Hi Steven, On Wed, Jan 22, 2014 at 11:45:50AM +, Steven Chamberlain wrote: > On 22/01/14 10:49, Andreas Tille wrote: > > Well, for king we have another problem that it depends from the > > deprecated libjogl-java and should be replaced by libjogl2-java. > > I tried removing libjogl-java, and

Re: qiime REMOVED from testing

2014-01-27 Thread Andreas Tille
Hi Steven, On Tue, Jan 21, 2014 at 11:35:33PM +, Steven Chamberlain wrote: > >>> https://buildd.debian.org/status/package.php?p=libjogl-java > > > FastTree.c downloaded successfully. > FastTree built. > Traceback (most recent call last): > File "setup.py", line 183, in

Re: qiime REMOVED from testing

2014-01-27 Thread Steven Chamberlain
On 21/01/14 21:05, Andreas Tille wrote: >> https://buildd.debian.org/status/package.php?p=libjogl-java >>> FastTree.c downloaded successfully. >>> FastTree built. >>> Traceback (most recent call last): >>> File "setup.py", line 183, in >>> if download_UCLUST(): >>> File "setup.py", line 1

Re: qiime REMOVED from testing

2014-01-27 Thread Andreas Tille
Hi Steven, thanks for your quick response. On Tue, Jan 21, 2014 at 08:44:27PM +, Steven Chamberlain wrote: > On 21/01/14 20:32, Andreas Tille wrote: > > [...] #731190 which boils down to the question why libjogl-java is not > > available on kfreebsd. > > AFAICT that package has never been av

Re: qiime REMOVED from testing

2014-01-27 Thread Steven Chamberlain
>>> https://buildd.debian.org/status/package.php?p=libjogl-java > FastTree.c downloaded successfully. FastTree built. Traceback (most recent call last): File "setup.py", line 183, in if download_UCLUST(): File "setup.py", line 140, in download_UCLUST

Re: qiime REMOVED from testing

2014-01-27 Thread Steven Chamberlain
On 21/01/14 20:32, Andreas Tille wrote: > [...] #731190 which boils down to the question why libjogl-java is not > available on kfreebsd. AFAICT that package has never been available on kfreebsd: https://buildd.debian.org/status/logs.php?pkg=libjogl-java&arch=kfreebsd-amd64 I'm currently not sure

Re: qiime REMOVED from testing

2014-01-27 Thread Andreas Tille
Hi, thanks to the hint od Steven below I wonder if I could get more help to solve #731190 which boils down to the question why libjogl-java is not available on kfreebsd. I addressed this to the maintainer (debian-java) but his new upload did not fixed the issue obviously. It even seemed to make