Gareth Stockwell wrote:
Hi Kristl,
I'm not sure if PyMOL can do it, but it's not too hard to do a bit of
vector algebra which gives the answer.
Let the coordinates of the nitrogens be A, B, C, D, and the iron atom F.
Compute the centre of your nitrogens:
X = (A + B + C + D) / 4
Then you wor
Dear all,
I wonder whether it is possible to cut an object (e.g. a surface
representation of my protein) in a vertical plane as I would do using
slab. However, another object (e.g. my ligand) should not be affected by
this cut.
In the end, I would like to cut right through the substrate bind
