[PyMOL] Message: 2

2006-06-09 Thread Raúl Mera
Hi all, my system is a newly installed debian-3.1 linux. 'pymol' seems to be part of the installed package. But when I try to open pymol, I get the following error: $ pymol Traceback (most recent call last): File "/usr

Re: [PyMOL] fit: ExecutiveRMS-Error: No atoms selected.

2006-06-09 Thread Warren DeLano
Pascal, "ori" may be mapping to the "origin" selection operator instead of your structure. Is "ori" the full name of the object you loaded? If so, then this is a bug... Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster

[PyMOL] fit: ExecutiveRMS-Error: No atoms selected.

2006-06-09 Thread Pascal
Hello, I am using pymol version 0.99 rc6. When trying to superimpose 2 almost identical structures (the one is an energy-minimized version of the other, same number of residues and atoms), I always get this error-message: PyMOL>fit mini, ori ExecutiveRMS-Error: No atoms selected. Whith former v

Re: [PyMOL] debian: error in opening pymol

2006-06-09 Thread Esben Jannik Bjerrum
This is probably more of a installation/debian problem than a pymol problem. I would say that somehow the freeglut3 package is not installed on your system. apt-get install freeglut3 should solve it. However the Pymol package depends on freeglut3 so there might be more wrong with your system. tr

Re: [PyMOL] debian: error in opening pymol

2006-06-09 Thread Arvind Marathe
Thanks a lot Robert. The GUI opens now but with the following error given below. I can load a molecule and perform basic operations though. Do I need to install anything more or do anything else to get rid of the error? Regards, Arvind -