Re: [PyMOL] Editing of the pdb structure

Dear PyMol users! I have some structure.pdb from the md simulation wich consist of 1 chain not defined in the pdb file explicitly ( missing chain id in the pdb file). So the pymol recognise that chain as the ' ' . I need to rename this chain to the desired name ( e.g to chain A ). How I could

Re: [PyMOL] Editing of the pdb structure

Hi James, use the alter command: alter chain , chain=A See also http://pymolwiki.org/index.php/Alter Cheers, Thomas James Starlight wrote, On 04/26/12 09:18: Dear PyMol users! I have some structure.pdb from the md simulation wich consist of 1 chain not defined in the pdb file

Re: [PyMOL] Editing of the pdb structure

Thanks Thomas! Another question- I have my protein.pdb with some inserted crystall waters within protein interiour as well as water surrounded of my protein. I want to remove only sorrounding water but prevent internal water ( wich could be functional relevant ). How I could to select such